RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 SLC38A4Q969I6 547 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 ART5Q96L15 291 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 SAMD8Q96LT4 415 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 VSTM2LQ96N03 204 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 ZNF350Q9GZX5 532 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 ZNF304Q9HCX3 659 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 LANCL2Q9NS86 450 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 SLC22A11Q9NSA0 550 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 LIPT1Q9Y234 373 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 DSPPQ9NZW4 1301 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 A0A1W2PRQ8 180 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 H3BMH7 237 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 BRINP1O60477 761 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 CLUP10909 449 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 NUDT1P36639 197 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 CD79BP40259 229 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 SOX3P41225 446 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 NR0B1P51843 470 aaKnown RBP11.05□□□□□ -0.64
CCDC38-202ENST00000546386 CDC42P60953 191 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 CD226Q15762 336 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 GTF2IRD2BQ6EKJ0 949 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 GTF2IRD2Q86UP8 949 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 BCORP1Q8N888 145 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 MOAP1Q96BY2 351 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 ZNF764Q96H86 408 aaPredicted RBP11.05□□□□□ -0.64
CCDC38-202ENST00000546386 VN1R1Q9GZP7 353 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 ARRDC1-AS1Q9H2J1 176 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 ACOT13Q9NPJ3 140 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 MRPS33Q9Y291 106 aaKnown RBP11.05□□□□□ -0.64
CCDC38-202ENST00000546386 KLK4Q9Y5K2 254 aa11.05□□□□□ -0.64
CCDC38-202ENST00000546386 CEP250Q9BV73 2442 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 CDHR4A6H8M9 788 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 TRIM64A6NGJ6 449 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 ZAR1LA6NP61 321 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 FAAHO00519 579 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 OPN1LWP04000 364 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 IFI30P13284 250 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 ITIH1P19827 911 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 GRK5P34947 590 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 GIPRP48546 466 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 SLC34A3Q8N130 599 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 OR13C2Q8NGS9 318 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 RASSF5Q8WWW0 418 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 ZNF501Q96CX3 271 aaPredicted RBP11.04□□□□□ -0.64
CCDC38-202ENST00000546386 TSSK6Q9BXA6 273 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 SAP130Q9H0E3 1048 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 CACYBPQ9HB71 228 aaKnown RBP11.04□□□□□ -0.64
CCDC38-202ENST00000546386 SERTAD3Q9UJW9 196 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 BLOC1S6Q9UL45 172 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 TPRKBQ9Y3C4 175 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 MUC6Q6W4X9 2439 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 IGHV5-10-1A0A0J9YXX1 117 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 ZNF99A8MXY4 864 aaPredicted RBP11.04□□□□□ -0.64
CCDC38-202ENST00000546386 NID1P14543 1247 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 ZNF28P17035 718 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 FBLP22087 321 aaKnown RBP11.04□□□□□ -0.64
CCDC38-202ENST00000546386 GNA13Q14344 377 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 ZNHIT3Q15649 155 aaPredicted RBP11.04□□□□□ -0.64
CCDC38-202ENST00000546386 BICRALQ6AI39 1079 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 MARCH9Q86YJ5 346 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 SLC30A8Q8IWU4 369 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 PSD4Q8NDX1 1056 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 PHOSPHO1Q8TCT1 267 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 CCDC74BQ96LY2 380 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 FUZQ9BT04 418 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 NUDT9Q9BW91 350 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 DUSP21Q9H596 190 aa11.04□□□□□ -0.64
CCDC38-202ENST00000546386 ZNF346Q9UL40 294 aaKnown RBP11.04□□□□□ -0.64
CCDC38-202ENST00000546386 CLCA1A8K7I4 914 aa11.03□□□□□ -0.64
CCDC38-202ENST00000546386 MAGEB4O15481 346 aaPredicted RBP11.03□□□□□ -0.64
CCDC38-202ENST00000546386 ZNF354AO60765 605 aaPredicted RBP11.03□□□□□ -0.64
CCDC38-202ENST00000546386 REM1O75628 298 aa11.03□□□□□ -0.64
CCDC38-202ENST00000546386 NUDT14O95848 222 aa11.03□□□□□ -0.64
CCDC38-202ENST00000546386 HPGDP15428 266 aa11.03□□□□□ -0.64
CCDC38-202ENST00000546386 GABRB1P18505 474 aa11.03□□□□□ -0.64
CCDC38-202ENST00000546386 ST3GAL3Q11203 375 aa11.03□□□□□ -0.64
CCDC38-202ENST00000546386 ANKDD1AQ495B1 522 aa11.03□□□□□ -0.64
CCDC38-202ENST00000546386 OR2G6Q5TZ20 316 aa11.03□□□□□ -0.64
CCDC38-202ENST00000546386 THSD4Q6ZMP0 1018 aa11.03□□□□□ -0.64
CCDC38-202ENST00000546386 WDR36Q8NI36 951 aaKnown RBP11.03□□□□□ -0.64
CCDC38-202ENST00000546386 SLC2A12Q8TD20 617 aa11.03□□□□□ -0.64
CCDC38-202ENST00000546386 ARHGDIGQ99819 225 aa11.03□□□□□ -0.64
CCDC38-202ENST00000546386 BTBD2Q9BX70 525 aa11.03□□□□□ -0.64
CCDC38-202ENST00000546386 HCAR1Q9BXC0 346 aa11.03□□□□□ -0.64
CCDC38-202ENST00000546386 VCX3AQ9NNX9 186 aa11.03□□□□□ -0.64
CCDC38-202ENST00000546386 MEPEQ9NQ76 525 aaPredicted RBP11.03□□□□□ -0.64
CCDC38-202ENST00000546386 PSORS1C1Q9UIG5 152 aa11.03□□□□□ -0.64
CCDC38-202ENST00000546386 ACAD8Q9UKU7 415 aa11.03□□□□□ -0.64
CCDC38-202ENST00000546386 CBLCQ9ULV8 474 aa11.03□□□□□ -0.64
CCDC38-202ENST00000546386 CEP295Q9C0D2 2601 aa11.03□□□□□ -0.64
CCDC38-202ENST00000546386 A0A1B0GTQ1 180 aa11.03□□□□□ -0.64
CCDC38-202ENST00000546386 J3QRK9 145 aa11.03□□□□□ -0.64
CCDC38-202ENST00000546386 SCRG1O75711 98 aa11.03□□□□□ -0.64
CCDC38-202ENST00000546386 OMPP47874 163 aa11.03□□□□□ -0.64
CCDC38-202ENST00000546386 TGM4P49221 684 aa11.03□□□□□ -0.64
CCDC38-202ENST00000546386 LSAMPQ13449 338 aa11.03□□□□□ -0.64
CCDC38-202ENST00000546386 TOMM34Q15785 309 aaPredicted RBP11.03□□□□□ -0.64
CCDC38-202ENST00000546386 MANEAQ5SRI9 462 aa11.03□□□□□ -0.64
CCDC38-202ENST00000546386 SLC16A12Q6ZSM3 486 aa11.03□□□□□ -0.64
CCDC38-202ENST00000546386 LHFPL3Q86UP9 236 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms