RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 OR52N2Q8NGI0 321 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 RP9Q8TA86 221 aaKnown RBP5.81□□□□□ -1.48
PRKDC-211ENST00000546304 ADAMTS15Q8TE58 950 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 PIK3R3Q92569 461 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 CDS1Q92903 461 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 TMBIM1Q969X1 311 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 EFHD2Q96C19 240 aaPredicted RBP5.81□□□□□ -1.48
PRKDC-211ENST00000546304 CMTM5Q96DZ9 223 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 WBP1Q96G27 269 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 SLC35A4Q96G79 324 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 C5orf34Q96MH7 638 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 SIGLEC12Q96PQ1 595 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 OR7D2Q96RA2 312 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 CGREF1Q99674 301 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 SLC39A3Q9BRY0 314 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 SLC25A18Q9H1K4 315 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 OR51I1Q9H343 314 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 PIGUQ9H490 435 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 RAD21L1Q9H4I0 556 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 IKZF5Q9H5V7 419 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 TRIM45Q9H8W5 580 aaPredicted RBP5.81□□□□□ -1.48
PRKDC-211ENST00000546304 TPT1P8Q9HAU6 139 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 IL1RL2Q9HB29 575 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 GIN1Q9NXP7 522 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 PLA2G3Q9NZ20 509 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 STMN3Q9NZ72 180 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 LRFN1Q9P244 771 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 CBLCQ9ULV8 474 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 CORO2BQ9UQ03 480 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 B3GNT3Q9Y2A9 372 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 EMC9Q9Y3B6 208 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 NPFFR2Q9Y5X5 522 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 NCKAP5O14513 1909 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 ZGRF1Q86YA3 2104 aa5.81□□□□□ -1.48
PRKDC-211ENST00000546304 MED12Q93074 2177 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 C15orf38-AP3S2A0A0A6YYH1 394 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 A0A0G2JMM0 328 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 LOC100653049A0A140TA62 436 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 A0A1W2PPB8 328 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 A0A1W2PRS3 328 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 PRAMEF25A6NGN4 478 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 OR6C70A6NIJ9 312 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 DUXAA6NLW8 204 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 KIR3DP1A8MWS1 328 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 NUDT19A8MXV4 375 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 CLIC1O00299 241 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 HMGN4O00479 90 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 TP53I11O14683 189 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 SMAD7O15105 426 aaKnown RBP5.8□□□□□ -1.48
PRKDC-211ENST00000546304 HS6ST1O60243 411 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 KIAA0513O60268 411 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 NME2P1O60361 137 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 TSPAN2O60636 221 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 ICOSLGO75144 302 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 UGT2B11O75310 529 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 REM1O75628 298 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 KRT34O76011 436 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 KCNK2O95069 426 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 UNC5CO95185 931 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 CBX6O95503 412 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 AGR2O95994 175 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 AK1P00568 194 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 CCL3P10147 92 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 ETFAP13804 333 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 NAGAP17050 411 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 MATN1P21941 496 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 CRATP43155 626 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 CPA2P48052 419 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 PSMD4P55036 377 aaKnown RBP5.8□□□□□ -1.48
PRKDC-211ENST00000546304 MTPNP58546 118 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 DSTNP60981 165 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 EFR3AQ14156 821 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 ZNF169Q14929 603 aaPredicted RBP5.8□□□□□ -1.48
PRKDC-211ENST00000546304 CYP51A1Q16850 503 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.8□□□□□ -1.48
PRKDC-211ENST00000546304 GCNT6Q5T4J0 391 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 CCNJQ5T5M9 372 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 ATAD3BQ5T9A4 648 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 PRAMEF20Q5VT98 475 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 POMZP3Q6PJE2 187 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 IL20RBQ6UXL0 311 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 Q6ZS92 163 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 MDGA2Q7Z553 956 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 ARPINQ7Z6K5 226 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 GALNT10Q86SR1 603 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 ZNF227Q86WZ6 799 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 FBXW8Q8N3Y1 598 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 BCORP1Q8N888 145 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 TMEM178AQ8NBL3 297 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 PSD4Q8NDX1 1056 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 OR8J3Q8NGG0 315 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 OR5M3Q8NGP4 307 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 PAQR8Q8TEZ7 354 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 DIO2Q92813 273 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 HAS2Q92819 552 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 RAB8BQ92930 207 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 HGDQ93099 445 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 PNPLA2Q96AD5 504 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 TMEM125Q96AQ2 219 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 SCMH1Q96GD3 660 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms