RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 ZDHHC5Q9C0B5 715 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 MED20Q9H944 212 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 PELI2Q9HAT8 420 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 SLC35C2Q9NQQ7 365 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 SDHAF2Q9NX18 166 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 NLGN3Q9NZ94 848 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 OBSL1O75147 1896 aa13.25□□□□□ -0.29
SRP54-202ENST00000546080 TSPAN11A1L157 253 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 PLPP2O43688 288 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 ACADLP28330 430 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 HOXD10P28358 340 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 NUP62P37198 522 aaPredicted RBP13.24□□□□□ -0.29
SRP54-202ENST00000546080 CRHR2Q13324 411 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 DYRK1AQ13627 763 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 KLF9Q13886 244 aaPredicted RBP13.24□□□□□ -0.29
SRP54-202ENST00000546080 TCTE1Q5JU00 501 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 MBOAT2Q6ZWT7 520 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 GAREM2Q75VX8 874 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 MEPCEQ7L2J0 689 aaKnown RBP13.24□□□□□ -0.29
SRP54-202ENST00000546080 ADCK2Q7Z695 626 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 IFNL1Q8IU54 200 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 NRSN1Q8IZ57 195 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 AMER3Q8N944 861 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 OR51Q1Q8NH59 317 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 KLHL15Q96M94 604 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 DDOQ99489 341 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 CHIAQ9BZP6 476 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 KLHL28Q9NXS3 571 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 NTNG1Q9Y2I2 539 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 KCNE3Q9Y6H6 103 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 MTCL1Q9Y4B5 1905 aaKnown RBP13.24□□□□□ -0.29
SRP54-202ENST00000546080 E9PI62 339 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 KLF4O43474 513 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 PRKRAO75569 313 aaKnown RBP13.24□□□□□ -0.29
SRP54-202ENST00000546080 ERAL1O75616 437 aaKnown RBP13.24□□□□□ -0.29
SRP54-202ENST00000546080 SOD2P04179 222 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 IFNA16P05015 189 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 SERPIND1P05546 499 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 CTSLP07711 333 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 SNRPBP14678 240 aaKnown RBP13.24□□□□□ -0.29
SRP54-202ENST00000546080 PTNP21246 168 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 SSR2P43308 183 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 CCR8P51685 355 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 RGS8P57771 180 aaPredicted RBP13.24□□□□□ -0.29
SRP54-202ENST00000546080 E2F1Q01094 437 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 GRIN2CQ14957 1233 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 PRAMEF8Q5VWM4 474 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 PRAMEF7Q5VXH5 474 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 BAIAP2L2Q6UXY1 529 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 TMEM64Q6YI46 380 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 C3P1Q6ZMU1 363 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 TMEM25Q86YD3 366 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 SFXN5Q8TD22 340 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 TMEM255BQ8WV15 326 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 SORCS1Q8WY21 1168 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 ST8SIA4Q92187 359 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 WBP1Q96G27 269 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 C16orf58Q96GQ5 468 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 SLC41A3Q96GZ6 507 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 C1QTNF6Q9BXI9 259 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 UBQLN3Q9H347 655 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 DPEP2Q9H4A9 486 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 IL36AQ9UHA7 158 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 KCNMB2Q9Y691 235 aa13.24□□□□□ -0.29
SRP54-202ENST00000546080 A0A1W2PRG6 482 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 GLOD5A6NK44 160 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 PRAF2O60831 178 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 POP7O75817 140 aaKnown RBP13.23□□□□□ -0.29
SRP54-202ENST00000546080 ALDOBP05062 364 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 GJA1P17302 382 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 TAS2R43P59537 309 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 RPS7P62081 194 aaKnown RBP13.23□□□□□ -0.29
SRP54-202ENST00000546080 REEP5Q00765 189 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 RAB33AQ14088 237 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 GPNMBQ14956 572 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 TCTN1Q2MV58 587 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 ACSM3Q53FZ2 586 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 ZNF805Q5CZA5 627 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 NHLRC3Q5JS37 347 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 OR4C11Q6IEV9 310 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 ESPNLQ6ZVH7 1005 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 PRSS45Q7RTY3 260 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 GDF7Q7Z4P5 450 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 PXKQ7Z7A4 578 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 VN1R2Q8NFZ6 395 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 HAVCR2Q8TDQ0 301 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 CYB5D2Q8WUJ1 264 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 SFXN2Q96NB2 322 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 MCHR1Q99705 422 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 SMAD5Q99717 465 aaKnown RBP13.23□□□□□ -0.29
SRP54-202ENST00000546080 REG4Q9BYZ8 158 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 SLC38A1Q9H2H9 487 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 WDR26Q9H7D7 661 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 RRAGCQ9HB90 399 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 BRD7Q9NPI1 651 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 KRCC1Q9NPI7 259 aaPredicted RBP13.23□□□□□ -0.29
SRP54-202ENST00000546080 STARD7Q9NQZ5 370 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 ZNF275Q9NSD4 429 aaPredicted RBP13.23□□□□□ -0.29
SRP54-202ENST00000546080 ABRACLQ9P1F3 81 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 ADAM29Q9UKF5 820 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms