RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 ASB13Q8WXK3 278 aa6.04□□□□□ -1.44
SNHG1-225ENST00000545920 ADAMTS14Q8WXS8 1223 aa6.04□□□□□ -1.44
SNHG1-225ENST00000545920 TFGQ92734 400 aaPredicted RBP6.04□□□□□ -1.44
SNHG1-225ENST00000545920 UCN3Q969E3 161 aa6.04□□□□□ -1.44
SNHG1-225ENST00000545920 VWCEQ96DN2 955 aa6.04□□□□□ -1.44
SNHG1-225ENST00000545920 SCMH1Q96GD3 660 aa6.04□□□□□ -1.44
SNHG1-225ENST00000545920 COX14Q96I36 57 aa6.04□□□□□ -1.44
SNHG1-225ENST00000545920 HS6ST2Q96MM7 605 aa6.04□□□□□ -1.44
SNHG1-225ENST00000545920 GPR137Q96N19 417 aa6.04□□□□□ -1.44
SNHG1-225ENST00000545920 FYTTD1Q96QD9 318 aaKnown RBP6.04□□□□□ -1.44
SNHG1-225ENST00000545920 DCLRE1CQ96SD1 692 aaKnown RBP6.04□□□□□ -1.44
SNHG1-225ENST00000545920 HDAC8Q9BY41 377 aa6.04□□□□□ -1.44
SNHG1-225ENST00000545920 ACTRT3Q9BYD9 372 aa6.04□□□□□ -1.44
SNHG1-225ENST00000545920 ZBP1Q9H171 429 aa6.04□□□□□ -1.44
SNHG1-225ENST00000545920 MED28Q9H204 178 aa6.04□□□□□ -1.44
SNHG1-225ENST00000545920 OR2AG1Q9H205 316 aa6.04□□□□□ -1.44
SNHG1-225ENST00000545920 GLIPR2Q9H4G4 154 aa6.04□□□□□ -1.44
SNHG1-225ENST00000545920 MTHFD2LQ9H903 347 aaPredicted RBP6.04□□□□□ -1.44
SNHG1-225ENST00000545920 SLAMF7Q9NQ25 335 aa6.04□□□□□ -1.44
SNHG1-225ENST00000545920 POLE3Q9NRF9 147 aa6.04□□□□□ -1.44
SNHG1-225ENST00000545920 ZCCHC3Q9NUD5 404 aaKnown RBP6.04□□□□□ -1.44
SNHG1-225ENST00000545920 BABAM2Q9NXR7 383 aa6.04□□□□□ -1.44
SNHG1-225ENST00000545920 HAO2Q9NYQ3 351 aa6.04□□□□□ -1.44
SNHG1-225ENST00000545920 COMMD3Q9UBI1 195 aa6.04□□□□□ -1.44
SNHG1-225ENST00000545920 IRAK3Q9Y616 596 aa6.04□□□□□ -1.44
SNHG1-225ENST00000545920 ANAPC1Q9H1A4 1944 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 A0A0B4J293 547 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 WASHC1A8K0Z3 465 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 C1QTNF3-AMACRE9PGA6 284 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 GTPBP1O00178 669 aaKnown RBP6.03□□□□□ -1.44
SNHG1-225ENST00000545920 TGM5O43548 720 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 RNF13O43567 381 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 PLPP2O43688 288 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 SULT1B1O43704 296 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 HPGDSO60760 199 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 GATBO75879 557 aaKnown RBP6.03□□□□□ -1.44
SNHG1-225ENST00000545920 ARL6IP5O75915 188 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 UBL3O95164 117 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 TIAF1O95411 115 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 ECDO95905 644 aaPredicted RBP6.03□□□□□ -1.44
SNHG1-225ENST00000545920 TBX6O95947 436 aaPredicted RBP6.03□□□□□ -1.44
SNHG1-225ENST00000545920 TPOP07202 933 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 C8AP07357 584 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 CTSLP07711 333 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 HNRNPA1P09651 372 aaKnown RBP eCLIP6.03□□□□□ -1.44
SNHG1-225ENST00000545920 ALPPL2P10696 532 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 ADH5P11766 374 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 ACP5P13686 325 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 AHCYP23526 432 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 APEX1P27695 318 aaKnown RBP6.03□□□□□ -1.44
SNHG1-225ENST00000545920 ATP6V1E1P36543 226 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 FEN1P39748 380 aaKnown RBP6.03□□□□□ -1.44
SNHG1-225ENST00000545920 BUD31P41223 144 aaPredicted RBP6.03□□□□□ -1.44
SNHG1-225ENST00000545920 SSR2P43308 183 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 SLC6A11P48066 632 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 MMP15P51511 669 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 NCBP2P52298 156 aaKnown RBP eCLIP6.03□□□□□ -1.44
SNHG1-225ENST00000545920 STXBP1P61764 594 aaKnown RBP6.03□□□□□ -1.44
SNHG1-225ENST00000545920 SUMO1P63165 101 aaKnown RBP6.03□□□□□ -1.44
SNHG1-225ENST00000545920 MXD1Q05195 221 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 PRDX1Q06830 199 aaKnown RBP6.03□□□□□ -1.44
SNHG1-225ENST00000545920 MAP4K2Q12851 820 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 ZNF155Q12901 538 aaPredicted RBP6.03□□□□□ -1.44
SNHG1-225ENST00000545920 HSPB3Q12988 150 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 NOGQ13253 232 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 GALEQ14376 348 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 ELAVL3Q14576 367 aaKnown RBP6.03□□□□□ -1.44
SNHG1-225ENST00000545920 SYPL1Q16563 259 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 PRSS53Q2L4Q9 553 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 FAM214AQ32MH5 1076 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 CCDC58Q4VC31 144 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 EOGTQ5NDL2 527 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 NDUFAF5Q5TEU4 345 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 PLPP4Q5VZY2 271 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 RAET1GQ6H3X3 334 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 HEPHL1Q6MZM0 1159 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 MEPCEQ7L2J0 689 aaKnown RBP6.03□□□□□ -1.44
SNHG1-225ENST00000545920 C11orf74Q86VG3 221 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 RANBP3LQ86VV4 465 aaPredicted RBP6.03□□□□□ -1.44
SNHG1-225ENST00000545920 ZNF227Q86WZ6 799 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 KIF18BQ86Y91 864 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 CDK20Q8IZL9 346 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 SLC37A3Q8NCC5 494 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 KREMEN2Q8NCW0 462 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 OR4D11Q8NGI4 311 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 OR6T1Q8NGN1 323 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 BAHD1Q8TBE0 780 aaPredicted RBP6.03□□□□□ -1.44
SNHG1-225ENST00000545920 SLC9A6Q92581 669 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 SNAPC3Q92966 411 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 EXOSC8Q96B26 276 aaKnown RBP6.03□□□□□ -1.44
SNHG1-225ENST00000545920 RNF31Q96EP0 1072 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 RCC1LQ96I51 464 aaKnown RBP6.03□□□□□ -1.44
SNHG1-225ENST00000545920 F2RL3Q96RI0 385 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 CDC6Q99741 560 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 ZNF649Q9BS31 505 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 TIMM29Q9BSF4 260 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 DPH7Q9BTV6 452 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 NDC1Q9BTX1 674 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 OSGEPL1Q9H4B0 414 aa6.03□□□□□ -1.44
SNHG1-225ENST00000545920 SERHL2Q9H4I8 314 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms