RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 CHDHQ8NE62 594 aaPredicted RBP10.69□□□□□ -0.7
HDAC4-216ENST00000544989 TNIP2Q8NFZ5 429 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 OR4C3Q8NH37 302 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 LRRC8CQ8TDW0 803 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 ZNF75CPQ92670 426 aaPredicted RBP10.69□□□□□ -0.7
HDAC4-216ENST00000544989 SLC35G5Q96KT7 338 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 C7orf26Q96N11 449 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 CCDC115Q96NT0 180 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 OR7D2Q96RA2 312 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 TUBA1CQ9BQE3 449 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 TRIM8Q9BZR9 551 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 NMUR2Q9GZQ4 415 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 POLE3Q9NRF9 147 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 PAQR5Q9NXK6 330 aaPredicted RBP10.69□□□□□ -0.7
HDAC4-216ENST00000544989 FLRT3Q9NZU0 649 aa10.69□□□□□ -0.7
HDAC4-216ENST00000544989 OR2M5A3KFT3 312 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 CLCA1A8K7I4 914 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 SYT5O00445 386 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 HCRTR2O43614 444 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 TNFRSF21O75509 655 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 STX11O75558 287 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 SNRPB2P08579 225 aaKnown RBP10.68□□□□□ -0.7
HDAC4-216ENST00000544989 TMIGD3P0DMS9 266 aaPredicted RBP10.68□□□□□ -0.7
HDAC4-216ENST00000544989 KITP10721 976 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 FCGR2AP12318 317 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 ME2P23368 584 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 EPHA3P29320 983 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 CHI3L1P36222 383 aaPredicted RBP10.68□□□□□ -0.7
HDAC4-216ENST00000544989 KHKP50053 298 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 ATP12AP54707 1039 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 WNT3P56703 355 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 B3GALT5-AS1P59052 145 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 IRX1P78414 480 aaPredicted RBP10.68□□□□□ -0.7
HDAC4-216ENST00000544989 FAM174BQ3ZCQ3 159 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 PDCD4Q53EL6 469 aaKnown RBP10.68□□□□□ -0.7
HDAC4-216ENST00000544989 PDSS1Q5T2R2 415 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 APOOLQ6UXV4 268 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 MSANTD1Q6ZTZ1 278 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 C16orf62Q7Z3J2 963 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 P4HA3Q7Z4N8 544 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 KIF18BQ86Y91 864 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 GTPBP8Q8N3Z3 284 aaPredicted RBP10.68□□□□□ -0.7
HDAC4-216ENST00000544989 OR5AK3PQ8NH89 298 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 B4GALNT2Q8NHY0 566 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 DYDC1Q8WWB3 177 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 ARL8AQ96BM9 186 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 ZBTB9Q96C00 473 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 MAELQ96JY0 434 aaKnown RBP10.68□□□□□ -0.7
HDAC4-216ENST00000544989 PIGMQ9H3S5 423 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 NPDC1Q9NQX5 325 aaPredicted RBP10.68□□□□□ -0.7
HDAC4-216ENST00000544989 ZIM2Q9NZV7 527 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 CLCF1Q9UBD9 225 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 MARCOQ9UEW3 520 aaPredicted RBP10.68□□□□□ -0.7
HDAC4-216ENST00000544989 ZNF175Q9Y473 711 aa10.68□□□□□ -0.7
HDAC4-216ENST00000544989 NAV3Q8IVL0 2385 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 SLC22A20A6NK97 555 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 GTPBP1O00178 669 aaKnown RBP10.67□□□□□ -0.7
HDAC4-216ENST00000544989 UBDO15205 165 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 EIF4E2O60573 245 aaKnown RBP10.67□□□□□ -0.7
HDAC4-216ENST00000544989 SCN2BO60939 215 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 SLC22A3O75751 556 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 CPSF4O95639 269 aaKnown RBP10.67□□□□□ -0.7
HDAC4-216ENST00000544989 PGRP06401 933 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 ALDOCP09972 364 aaKnown RBP10.67□□□□□ -0.7
HDAC4-216ENST00000544989 ELK4P28324 431 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 ADH6P28332 368 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 STARP49675 285 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 ZNF136P52737 540 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 HPCAP84074 193 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 TMEM44Q2T9K0 475 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 ARHGAP11BQ3KRB8 267 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 KLHL26Q53HC5 615 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 SPANXN4Q5MJ08 99 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 CCNJQ5T5M9 372 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 GALNT10Q86SR1 603 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 CLECL1Q8IZS7 167 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 METTL25Q8N6Q8 603 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 TOR1AIP2Q8NFQ8 470 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 PHOSPHO1Q8TCT1 267 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 RNASE6Q93091 150 aaKnown RBP10.67□□□□□ -0.7
HDAC4-216ENST00000544989 NEURL3Q96EH8 262 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 OR52E6Q96RD3 313 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 PANX1Q96RD7 426 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 SDF2Q99470 211 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 SH3GL2Q99962 352 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 RTN4RQ9BZR6 473 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 WDR55Q9H6Y2 383 aaPredicted RBP10.67□□□□□ -0.7
HDAC4-216ENST00000544989 RMND5AQ9H871 391 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 MCCC2Q9HCC0 563 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 MED17Q9NVC6 651 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 ZNF337Q9Y3M9 751 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 DTNAQ9Y4J8 743 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 GPR45Q9Y5Y3 372 aa10.67□□□□□ -0.7
HDAC4-216ENST00000544989 ANKHD1Q8IWZ3 2542 aaKnown RBP10.66□□□□□ -0.7
HDAC4-216ENST00000544989 MED12Q93074 2177 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 GOLGA8QA0A0J9YX86 632 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 GOLGA8OA6NCC3 632 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 GJE1A6NN92 205 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 B4DXG7 233 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 GOLGA8NF8WBI6 632 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms