RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 KIR3DX1Q9H7L2 352 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 WASH6PQ9NQA3 447 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 BIN3Q9NQY0 253 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 MED17Q9NVC6 651 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 OR6C2Q9NZP2 312 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 PRODH2Q9UF12 536 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 CYP8B1Q9UNU6 501 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 SNX11Q9Y5W9 270 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 MGAMO43451 1857 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 C5orf51A6NDU8 294 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 A8MUA0 341 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 C1orf196B1AJZ1 125 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 WRBO00258 174 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 EEF1E1O43324 174 aaKnown RBP5.42□□□□□ -1.54
VPS50-220ENST00000544910 PPM1BO75688 479 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 APBB3O95704 486 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 CHRNB1P11230 501 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 CPMP14384 443 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 PCMT1P22061 227 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 BSGP35613 385 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 TSFMP43897 325 aaKnown RBP5.42□□□□□ -1.54
VPS50-220ENST00000544910 RPS25P62851 125 aaKnown RBP5.42□□□□□ -1.54
VPS50-220ENST00000544910 CRYZQ08257 329 aaKnown RBP5.42□□□□□ -1.54
VPS50-220ENST00000544910 FAM189A2Q15884 450 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 CTF1Q16619 201 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 STEAP3Q658P3 488 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 PYHIN1Q6K0P9 492 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 FAM198BQ6UWH4 519 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 WDR53Q7Z5U6 358 aaPredicted RBP5.42□□□□□ -1.54
VPS50-220ENST00000544910 NLGN4XQ8N0W4 816 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 RPLP0P6Q8NHW5 317 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 C1orf216Q8TAB5 229 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 TMEM239Q8WW34 195 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 NXPE2Q96DL1 559 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 ARL5BQ96KC2 179 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 FCRL1Q96LA6 429 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 DHRS1Q96LJ7 313 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 IL20RAQ9UHF4 553 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 CLCA3PQ9Y6N3 262 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 LINC01553A4QN01 128 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 PRRT4C9JH25 899 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 RFPL3O75679 317 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 RPP14O95059 124 aaKnown RBP5.42□□□□□ -1.54
VPS50-220ENST00000544910 GABRA5P31644 462 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 GRK5P34947 590 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 IDUAP35475 653 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 NFATC4Q14934 902 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 KCNJ8Q15842 424 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 FCRLBQ6BAA4 426 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 TANGO2Q6ICL3 276 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 SLC48A1Q6P1K1 146 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 CNIH2Q6PI25 160 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 MBOAT2Q6ZWT7 520 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 SLC29A4Q7RTT9 530 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 CPOQ8IVL8 374 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 SLC35F2Q8IXU6 374 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 ZNF440Q8IYI8 595 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 NANOGP1Q8N7R0 232 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 OR10H5Q8NGA6 315 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 ZDHHC1Q8WTX9 485 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 THAP4Q8WY91 577 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 SMPDL3BQ92485 455 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 THRSPQ92748 146 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 RIT1Q92963 219 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 WDR34Q96EX3 536 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 C16orf58Q96GQ5 468 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 DPCDQ9BVM2 203 aaPredicted RBP5.42□□□□□ -1.54
VPS50-220ENST00000544910 CDCA4Q9BXL8 241 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 MMP28Q9H239 520 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 ANKRD19PQ9H560 264 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 C8orf33Q9H7E9 229 aaPredicted RBP5.42□□□□□ -1.54
VPS50-220ENST00000544910 MBNL1Q9NR56 388 aaKnown RBP5.42□□□□□ -1.54
VPS50-220ENST00000544910 INPP5EQ9NRR6 644 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 PTTG3PQ9NZH4 202 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 PLEKHA6Q9Y2H5 1048 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 ENTPD2Q9Y5L3 495 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 ANTXRLA6NF34 631 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 BLOC1S5-TXNDC5H3BN57 136 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 RNF13O43567 381 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 PRKAR1BP31321 381 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 IGFALSP35858 605 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 NKX2-5P52952 324 aaPredicted RBP5.42□□□□□ -1.54
VPS50-220ENST00000544910 HOXC5Q00444 222 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 OXA1LQ15070 435 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 ELOCQ15369 112 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 C18orf63Q68DL7 685 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 ZNF836Q6ZNA1 936 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 MEPCEQ7L2J0 689 aaKnown RBP5.42□□□□□ -1.54
VPS50-220ENST00000544910 PRICKLE2Q7Z3G6 844 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 METTL27Q8N6F8 245 aaPredicted RBP5.42□□□□□ -1.54
VPS50-220ENST00000544910 GALNT11Q8NCW6 608 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 OR51A7Q8NH64 312 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 PHOSPHO1Q8TCT1 267 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 RNF31Q96EP0 1072 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 PDXPQ96GD0 296 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 DDX31Q9H8H2 851 aaKnown RBP5.42□□□□□ -1.54
VPS50-220ENST00000544910 IL21RQ9HBE5 538 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 C1GALT1Q9NS00 363 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 N6AMT1Q9Y5N5 214 aa5.42□□□□□ -1.54
VPS50-220ENST00000544910 CSNK1G3Q9Y6M4 447 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms