RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 FNDC7Q5VTL7 733 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 AP1ARQ63HQ0 302 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 TIGD3Q6B0B8 471 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PLCZ1Q86YW0 608 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 MISPQ8IVT2 679 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 OR4K17Q8NGC6 315 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 OR52P1PQ8NH57 321 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 OIT3Q8WWZ8 545 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SH3YL1Q96HL8 342 aaPredicted RBP13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ZNF607Q96SK3 696 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 CDRT15Q96T59 188 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 KCTD14Q9BQ13 255 aaPredicted RBP13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 TSPAN10Q9H1Z9 355 aaPredicted RBP13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 AGPAT4Q9NRZ5 378 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 MED11Q9P086 117 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 TMEM181Q9P2C4 612 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ZNF232Q9UNY5 417 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 NCKAP5O14513 1909 aa13.21□□□□□ -0.3
TNFRSF1A-216ENST00000543995 GSTA4O15217 222 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 DNAJA2O60884 412 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 SERPINB7O75635 380 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 CBR3O75828 277 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 TRAPPC6AO75865 159 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 GLSO94925 669 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 RFPL3SP0C7P2 107 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 UBL4AP11441 157 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 RPS4Y1P22090 263 aaKnown RBP13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 MAGEA5P43359 124 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 GSK3BP49841 420 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 LIN52Q52LA3 116 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ZNF311Q5JNZ3 666 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 RNFT1Q5M7Z0 435 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 BNC2Q6ZN30 1099 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 EIF3MQ7L2H7 374 aaKnown RBP13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 PRICKLE2Q7Z3G6 844 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 VRK2Q86Y07 508 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 MICU2Q8IYU8 434 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 FAM109AQ8N4B1 249 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 TMEM251Q8N6I4 163 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 TMCO5AQ8N6Q1 288 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 RNF148Q8N7C7 305 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 CPT1CQ8TCG5 803 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 SLC26A7Q8TE54 656 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 NTNG2Q96CW9 530 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 DTNBP1Q96EV8 351 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 SPATA5L1Q9BVQ7 753 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 DSN1Q9H410 356 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ZNF703Q9H7S9 590 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 PTGES2Q9H7Z7 377 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 OLAHQ9NV23 265 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ASF1BQ9NVP2 202 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 SEC14L3Q9UDX4 400 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 PACSIN3Q9UKS6 424 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 SLC35A3Q9Y2D2 325 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 NTNG1Q9Y2I2 539 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 C15orf41Q9Y2V0 281 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 IFT52Q9Y366 437 aa13.2□□□□□ -0.3
TNFRSF1A-216ENST00000543995 CLDN24A6NM45 220 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 NPIPA5E9PKD4 350 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ADAM10O14672 748 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ZNF264O43296 627 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 SUV39H1O43463 412 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 NUDT14O95848 222 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 PABPC4LP0CB38 370 aaKnown RBP13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 UBTFL6P0CB48 400 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 NID1P14543 1247 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 CPOXP36551 454 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 CCR4P51679 360 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 KCNJ10P78508 379 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 BNIP1Q12981 228 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 VEZF1Q14119 521 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 HYAL4Q2M3T9 481 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 NDUFAF6Q330K2 333 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 SAMD4BQ5PRF9 694 aaKnown RBP13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 C6orf89Q6UWU4 347 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 PATL1Q86TB9 770 aaKnown RBP13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ZNF843Q8N446 348 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 TNIP2Q8NFZ5 429 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 B4GALNT2Q8NHY0 566 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 FAR1Q8WVX9 515 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 DEFB127Q9H1M4 99 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 C1orf21Q9H246 121 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ARMC7Q9H6L4 198 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 GMPR2Q9P2T1 348 aaKnown RBP13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 DKKL1Q9UK85 242 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 FBXL2Q9UKC9 423 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 NPIPA1Q9UND3 350 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ZNF443Q9Y2A4 671 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 CARD8Q9Y2G2 431 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 GPC6Q9Y625 555 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 ATRXP46100 2492 aa13.19□□□□□ -0.3
TNFRSF1A-216ENST00000543995 PRORSD1PA6NEY8 169 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 B8ZZF3 427 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 M0QX08 132 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 EBAG9O00559 213 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 GYG2O15488 501 aa13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 CDC40O60508 579 aaKnown RBP eCLIP13.18□□□□□ -0.3
TNFRSF1A-216ENST00000543995 THBS1P07996 1170 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms