RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 DESI1Q6ICB0 168 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 APOOLQ6UXV4 268 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 GALNT10Q86SR1 603 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 MARCH3Q86UD3 253 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 PTRH1Q86Y79 214 aaKnown RBP11.12□□□□□ -0.63
DDX55-210ENST00000543016 ZNF440Q8IYI8 595 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 MICU2Q8IYU8 434 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 DEFB107AQ8IZN7 70 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 C10orf111Q8N326 155 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 FAM109AQ8N4B1 249 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 WDSUB1Q8N9V3 476 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 RBM15BQ8NDT2 890 aaKnown RBP11.12□□□□□ -0.63
DDX55-210ENST00000543016 OR52P1PQ8NH57 321 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 PHOSPHO1Q8TCT1 267 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 DUSP19Q8WTR2 217 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 WDR60Q8WVS4 1066 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 FAR1Q8WVX9 515 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 BARD1Q99728 777 aaKnown RBP11.12□□□□□ -0.63
DDX55-210ENST00000543016 TTTY12Q9BZ98 90 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 RUBCNLQ9H714 662 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 ACKR4Q9NPB9 350 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 EXOSC3Q9NQT5 275 aaKnown RBP11.12□□□□□ -0.63
DDX55-210ENST00000543016 ADA2Q9NZK5 511 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 FLRT3Q9NZU0 649 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 C15orf41Q9Y2V0 281 aa11.12□□□□□ -0.63
DDX55-210ENST00000543016 GPC6Q9Y625 555 aaPredicted RBP11.12□□□□□ -0.63
DDX55-210ENST00000543016 A0A087WZY1 265 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 LRRC3CA6NJW4 275 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 ADAM10O14672 748 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 ZNF264O43296 627 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 SUV39H1O43463 412 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 CSTAP01040 98 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 PABPC4LP0CB38 370 aaKnown RBP11.11□□□□□ -0.63
DDX55-210ENST00000543016 UBL4AP11441 157 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 HTR1EP28566 365 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 SRD5A2P31213 254 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 SLC6A8P48029 635 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 GSK3BP49841 420 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 PPIAP62937 165 aaKnown RBP11.11□□□□□ -0.63
DDX55-210ENST00000543016 GABPB1Q06547 395 aaPredicted RBP11.11□□□□□ -0.63
DDX55-210ENST00000543016 SLC10A1Q14973 349 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 GLYR1Q49A26 553 aaPredicted RBP11.11□□□□□ -0.63
DDX55-210ENST00000543016 EIPR1Q53HC9 387 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 SOWAHCQ53LP3 525 aaPredicted RBP11.11□□□□□ -0.63
DDX55-210ENST00000543016 FNDC7Q5VTL7 733 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 BICRALQ6AI39 1079 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 DHRS4L2Q6PKH6 230 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 GRAMD2AQ8IUY3 354 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 ZNF614Q8N883 585 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 FADS6Q8N9I5 356 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 OR4K17Q8NGC6 315 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 B4GALNT2Q8NHY0 566 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 NR4A3Q92570 626 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 POP5Q969H6 163 aaKnown RBP11.11□□□□□ -0.63
DDX55-210ENST00000543016 ARSGQ96EG1 525 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 JSRP1Q96MG2 331 aaPredicted RBP11.11□□□□□ -0.63
DDX55-210ENST00000543016 TAAR6Q96RI8 345 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 CDRT15Q96T59 188 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 KCTD14Q9BQ13 255 aaPredicted RBP11.11□□□□□ -0.63
DDX55-210ENST00000543016 TRIM8Q9BZR9 551 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 LAT2Q9GZY6 243 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 ZDHHC11Q9H8X9 412 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 GALNT9Q9HCQ5 603 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 OLAHQ9NV23 265 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 TAS2R1Q9NYW7 299 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 KCNE5Q9UJ90 142 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 ITPR1Q14643 2758 aa11.11□□□□□ -0.63
DDX55-210ENST00000543016 NINQ8N4C6 2090 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 NPIPA5A0A0B4J1W7 369 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 A0A0G2JMM0 328 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 A0A1W2PPB8 328 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 A0A1W2PRS3 328 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 CDHR4A6H8M9 788 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 PINLYPA6NC86 204 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 KIR3DP1A8MWS1 328 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 B8ZZF3 427 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 FAM47E-STBD1D6RA91 191 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 NPIPA7E9PJI5 369 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 G3V3Y1 287 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 LINC01387J3KSC0 135 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 M0QX08 132 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 SYT5O00445 386 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 TFECO14948 347 aaPredicted RBP11.1□□□□□ -0.63
DDX55-210ENST00000543016 GSTA4O15217 222 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 GYG2O15488 501 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 HCRTR2O43614 444 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 HPNP05981 417 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 C8BP07358 591 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 NPIPA8P0DM63 369 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 UQCRBP14927 111 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 GCKP35557 465 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 PGM1P36871 562 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 P2RX1P51575 399 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 DSCR4P56555 118 aaPredicted RBP11.1□□□□□ -0.63
DDX55-210ENST00000543016 BNIP2Q12982 314 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 INPP5JQ15735 1006 aaPredicted RBP11.1□□□□□ -0.63
DDX55-210ENST00000543016 MAPK14Q16539 360 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 FXNQ16595 210 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 ZNF311Q5JNZ3 666 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 ZNF324BQ6AW86 544 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms