RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 SHC2P98077 582 aa13.76□□□□□ -0.21
DDX55-209ENST00000542286 PUS10Q3MIT2 529 aaKnown RBP13.76□□□□□ -0.21
DDX55-209ENST00000542286 TMEM201Q5SNT2 666 aa13.76□□□□□ -0.21
DDX55-209ENST00000542286 TYW3Q6IPR3 259 aaKnown RBP13.76□□□□□ -0.21
DDX55-209ENST00000542286 ZNF836Q6ZNA1 936 aa13.76□□□□□ -0.21
DDX55-209ENST00000542286 DGAT2L6Q6ZPD8 337 aa13.76□□□□□ -0.21
DDX55-209ENST00000542286 GDF7Q7Z4P5 450 aa13.76□□□□□ -0.21
DDX55-209ENST00000542286 RDH10Q8IZV5 341 aa13.76□□□□□ -0.21
DDX55-209ENST00000542286 LRRC25Q8N386 305 aaPredicted RBP13.76□□□□□ -0.21
DDX55-209ENST00000542286 PFN4Q8NHR9 129 aa13.76□□□□□ -0.21
DDX55-209ENST00000542286 MND1Q9BWT6 205 aa13.76□□□□□ -0.21
DDX55-209ENST00000542286 POLDIP3Q9BY77 421 aaKnown RBP13.76□□□□□ -0.21
DDX55-209ENST00000542286 ACTRT3Q9BYD9 372 aa13.76□□□□□ -0.21
DDX55-209ENST00000542286 C20orf141Q9NUB4 165 aa13.76□□□□□ -0.21
DDX55-209ENST00000542286 OR6C2Q9NZP2 312 aa13.76□□□□□ -0.21
DDX55-209ENST00000542286 LEUTXA8MZ59 168 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 SOCS6O14544 535 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 CT62P0C5K7 136 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 SLC35G6P0C7Q6 338 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 OMPP47874 163 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 TPMTP51580 245 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 TEKQ02763 1124 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 NFATC4Q14934 902 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 BTBD16Q32M84 506 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 ABI3BPQ7Z7G0 1075 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 TCTE3Q8IZS6 198 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 ESX1Q8N693 406 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 ZNF614Q8N883 585 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 FGF11Q92914 225 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 C1GALT1C1Q96EU7 318 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 GABRG3Q99928 467 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 WDR45Q9Y484 360 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 COL6A3P12111 3177 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 OR2B3O76000 313 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 UBXN7O94888 489 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 PIPP12273 146 aaPredicted RBP13.75□□□□□ -0.21
DDX55-209ENST00000542286 PSMA1P25786 263 aaKnown RBP13.75□□□□□ -0.21
DDX55-209ENST00000542286 SMIM11AP58511 58 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 RHAGQ02094 409 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 HNRNPA0Q13151 305 aaKnown RBP13.75□□□□□ -0.21
DDX55-209ENST00000542286 ASAH1Q13510 395 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 NCF4Q15080 339 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 FAM205BPQ63HN1 556 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 SLC27A4Q6P1M0 643 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 BHLHB9Q6PI77 547 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 FIGLAQ6QHK4 219 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 LIX1LQ8IVB5 337 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 FAM26EQ8N5C1 309 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 CAMKK1Q8N5S9 505 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 OR13H1Q8NG92 308 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 SAMD8Q96LT4 415 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 WDR92Q96MX6 357 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 NELL2Q99435 816 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 DPH1Q9BZG8 443 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 C12orf10Q9HB07 376 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 DZANK1Q9NVP4 752 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 C2orf42Q9NWW7 574 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 TXNL4BQ9NX01 149 aaKnown RBP13.75□□□□□ -0.21
DDX55-209ENST00000542286 CLDND1Q9NY35 253 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 MALT1Q9UDY8 824 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 TESQ9UGI8 421 aaKnown RBP13.75□□□□□ -0.21
DDX55-209ENST00000542286 PIAS3Q9Y6X2 628 aa13.75□□□□□ -0.21
DDX55-209ENST00000542286 TCRBV21S2A2A0A5A6 115 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 H0YGG7 62 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 SGK494L7N484 410 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 SCO1O75880 301 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 PSKH1P11801 424 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 SDC2P34741 201 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 SMSP52788 366 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 ARF3P61204 181 aaPredicted RBP13.74□□□□□ -0.21
DDX55-209ENST00000542286 TNFRSF17Q02223 184 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 RGS1Q08116 209 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 NNATQ16517 81 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 CDC73Q6P1J9 531 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 Q6ZSR6 202 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 ZNF767PQ75MW2 155 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 SLC22A18ASQ8N1D0 253 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 DEFB119Q8N690 84 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 SFXN5Q8TD22 340 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 GAL3ST3Q96A11 431 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 SLC41A3Q96GZ6 507 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 ZNF764Q96H86 408 aaPredicted RBP13.74□□□□□ -0.21
DDX55-209ENST00000542286 CCDC120Q96HB5 630 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 ARHGDIGQ99819 225 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 SPATA5L1Q9BVQ7 753 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 C1QTNF7Q9BXJ2 289 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 TTTY10Q9BZA0 68 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 ACTR10Q9NZ32 417 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 ZNF443Q9Y2A4 671 aaPredicted RBP13.74□□□□□ -0.21
DDX55-209ENST00000542286 WDFY4Q6ZS81 3184 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 GXYLT2A0PJZ3 443 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 GNB5O14775 395 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 RAB36O95755 333 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 MSL3P1P0C860 447 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 NT5EP21589 574 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 SRP54P61011 504 aaKnown RBP13.74□□□□□ -0.21
DDX55-209ENST00000542286 EFNB1P98172 346 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 TNK1Q13470 666 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 OCLNQ16625 522 aa13.74□□□□□ -0.21
DDX55-209ENST00000542286 PXDC1Q5TGL8 231 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms