RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 CTAGE15A4D2H0 777 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 RNF222A6NCQ9 220 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 LRIT2A6NDA9 550 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 LRRC30A6NM36 301 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 HHLA1C9JL84 531 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 H0Y8G0 127 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 H0YL77 283 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 SGK1O00141 431 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 SDHDO14521 159 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 CXCL11O14625 94 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 PRRG1O14668 218 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 CTAGE5O15320 804 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 ZNF208O43345 1280 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 CIB2O75838 187 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 CEACAM4O75871 244 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 TM7SF2O76062 418 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 MT-ND1P03886 318 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 PPIAL4GP0DN37 164 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 ANXA3P12429 323 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 HSD17B1P14061 328 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 FOSL2P15408 326 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 H2AFXP16104 143 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-217ENST00000541578 PTPN4P29074 926 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 PDHA2P29803 388 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 PPP2R1BP30154 601 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 GDI1P31150 447 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 CYLC1P35663 651 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-217ENST00000541578 CD151P48509 253 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 ACADVLP49748 655 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 METAP1P53582 386 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 CRYBA2P53672 197 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 AIF1P55008 147 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 ATP5IP56385 69 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-217ENST00000541578 NAAAQ02083 359 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 FGL1Q08830 312 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 MRPL28Q13084 256 aaKnown RBP3.57□□□□□ -1.84
SNHG1-217ENST00000541578 PPIL2Q13356 520 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 KIAA0141Q14154 515 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-217ENST00000541578 TTC23Q5W5X9 447 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-217ENST00000541578 PWWP2BQ6NUJ5 590 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 NEPROQ6NW34 567 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 SLC39A4Q6P5W5 647 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 CTAGE6Q86UF2 777 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 MNS1Q8NEH6 495 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 TRIM58Q8NG06 486 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 OR10G7Q8NGN6 311 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 OR1K1Q8NGR3 316 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 DLG5Q8TDM6 1919 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 LHX4Q969G2 390 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 UPRTQ96BW1 309 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 SLC25A36Q96CQ1 311 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 SDSLQ96GA7 329 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 ZBED3Q96IU2 234 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-217ENST00000541578 PRAC1Q96KF2 57 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 CPXM1Q96SM3 734 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 SLC39A3Q9BRY0 314 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 STRADBQ9C0K7 418 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 C11orf49Q9H6J7 331 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 NRN1Q9NPD7 142 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 FANCFQ9NPI8 374 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 ZNF71Q9NQZ8 489 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-217ENST00000541578 MED23Q9ULK4 1368 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 MGAT4AQ9UM21 535 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 DHRS7Q9Y394 339 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 PRUNE2Q8WUY3 3088 aa3.57□□□□□ -1.84
SNHG1-217ENST00000541578 ALPK3Q96L96 1907 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-217ENST00000541578 FAM47DPA6NHR8 397 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 PDHXO00330 501 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 FBP2O00757 339 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 RANBP6O60518 1105 aaKnown RBP3.56□□□□□ -1.84
SNHG1-217ENST00000541578 N4BP1O75113 896 aaKnown RBP3.56□□□□□ -1.84
SNHG1-217ENST00000541578 KHDRBS3O75525 346 aaKnown RBP3.56□□□□□ -1.84
SNHG1-217ENST00000541578 ZNF821O75541 412 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-217ENST00000541578 SCGNO76038 276 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 ECDO95905 644 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-217ENST00000541578 CD48P09326 243 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 HOXB7P09629 217 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 IQCF3P0C7M6 154 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 ZNF853P0CG23 659 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 DBTP11182 482 aaKnown RBP3.56□□□□□ -1.84
SNHG1-217ENST00000541578 TOP1P11387 765 aaKnown RBP3.56□□□□□ -1.84
SNHG1-217ENST00000541578 NCF2P19878 526 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-217ENST00000541578 PAX7P23759 505 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 EDNRAP25101 427 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 CA8P35219 290 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 OPRL1P41146 370 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 CEBPDP49716 269 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-217ENST00000541578 VCPP55072 806 aaKnown RBP3.56□□□□□ -1.84
SNHG1-217ENST00000541578 RPS27AP62979 156 aaKnown RBP3.56□□□□□ -1.84
SNHG1-217ENST00000541578 ZP4Q12836 540 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 ZNF177Q13360 481 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-217ENST00000541578 SELPLGQ14242 412 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 MESDQ14696 234 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 EXOC3L2Q2M3D2 409 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 ZNF699Q32M78 642 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 FKBP1CQ5VVH2 108 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 SLX4IPQ5VYV7 408 aa3.56□□□□□ -1.84
SNHG1-217ENST00000541578 SEL1L3Q68CR1 1132 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms