RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 RPL13AP3Q6NVV1 102 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 C1orf94Q6P1W5 598 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 MBOAT1Q6ZNC8 495 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 PARS2Q7L3T8 475 aaKnown RBP9.73□□□□□ -0.85
CHFR-219ENST00000541341 TSEN54Q7Z6J9 526 aaKnown RBP9.73□□□□□ -0.85
CHFR-219ENST00000541341 ADGRG3Q86Y34 549 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 GRAMD2AQ8IUY3 354 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 SLITRK4Q8IW52 837 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 TRIM48Q8IWZ4 208 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 TRAM1L1Q8N609 369 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 TCEANCQ8N8B7 351 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 OR9Q2Q8NGE9 314 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 OR5M3Q8NGP4 307 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 LHFPL5Q8TAF8 219 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 SAP25Q8TEE9 199 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 ELMO1Q92556 727 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 PHYHIPQ92561 330 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 RAB7BQ96AH8 199 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 ARRDC3Q96B67 414 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 ZBED6CLQ96FA7 236 aaPredicted RBP9.73□□□□□ -0.85
CHFR-219ENST00000541341 ZNF514Q96K75 400 aaPredicted RBP9.73□□□□□ -0.85
CHFR-219ENST00000541341 IL4I1Q96RQ9 567 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 BOCQ9BWV1 1114 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 MFRPQ9BY79 579 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 PCBD2Q9H0N5 130 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 SERHL2Q9H4I8 314 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 RNF167Q9H6Y7 350 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 RLIMQ9NVW2 624 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 CUEDC1Q9NWM3 386 aaPredicted RBP9.73□□□□□ -0.85
CHFR-219ENST00000541341 SEC14L3Q9UDX4 400 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 CYB5R1Q9UHQ9 305 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 ADAM29Q9UKF5 820 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 SLC13A4Q9UKG4 626 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 NPFFR2Q9Y5X5 522 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 PRSS21Q9Y6M0 314 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 COL27A1Q8IZC6 1860 aaPredicted RBP9.72□□□□□ -0.85
CHFR-219ENST00000541341 A0A087WV48 116 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 ARPC4-TTLL3A0A0A6YYG9 625 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 TMEM229AB2RXF0 380 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 KDM4EB2RXH2 506 aaPredicted RBP9.72□□□□□ -0.85
CHFR-219ENST00000541341 PYCARD-AS1I3L0S3 204 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 ERVH48-1M5A8F1 160 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 KPNA3O00505 521 aaPredicted RBP9.72□□□□□ -0.85
CHFR-219ENST00000541341 LRRTM2O43300 516 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 BRINP1O60477 761 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 RGS9O75916 674 aaPredicted RBP9.72□□□□□ -0.85
CHFR-219ENST00000541341 SOD1P00441 154 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 RPN2P04844 631 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 HBQ1P09105 142 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 UBL4AP11441 157 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 EPHA8P29322 1005 aaPredicted RBP9.72□□□□□ -0.85
CHFR-219ENST00000541341 AQP1P29972 269 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 PITPNBP48739 271 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 SPINT3P49223 89 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 MAN2A2P49641 1150 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 CRYBA2P53672 197 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 MRPS10P82664 201 aaKnown RBP9.72□□□□□ -0.85
CHFR-219ENST00000541341 SNTA1Q13424 505 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 DYRK1AQ13627 763 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 NFE2L1Q14494 772 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 KRT33BQ14525 404 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.72□□□□□ -0.85
CHFR-219ENST00000541341 ZNF284Q2VY69 593 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 SYT14P1Q58G82 188 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 PIP5KL1Q5T9C9 394 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 AGBL4Q5VU57 503 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 TYW3Q6IPR3 259 aaKnown RBP9.72□□□□□ -0.85
CHFR-219ENST00000541341 PGBD2Q6P3X8 592 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 CEACAM20Q6UY09 585 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 LRRC69Q6ZNQ3 347 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 RASSF6Q6ZTQ3 369 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 ERN2Q76MJ5 926 aaKnown RBP9.72□□□□□ -0.85
CHFR-219ENST00000541341 TMPRSS12Q86WS5 348 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 NRSN1Q8IZ57 195 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 C9orf62Q8N4C0 152 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 TEX19Q8NA77 164 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 POGLUT1Q8NBL1 392 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 TMEM145Q8NBT3 493 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 ZNF680Q8NEM1 530 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 HUS1BQ8NHY5 278 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 NEIL3Q8TAT5 605 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 LKAAEAR1Q8TD35 194 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 C16orf78Q8WTQ4 265 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 UCN3Q969E3 161 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 PHF21AQ96BD5 680 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 NXPE2Q96DL1 559 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 ZNF582Q96NG8 517 aaPredicted RBP9.72□□□□□ -0.85
CHFR-219ENST00000541341 MTERF1Q99551 399 aaKnown RBP9.72□□□□□ -0.85
CHFR-219ENST00000541341 TM9SF2Q99805 663 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 C17orf62Q9BQA9 187 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 TMEM168Q9H0V1 697 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 BCL2L10Q9HD36 194 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 CYSLTR2Q9NS75 346 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 KLHL28Q9NXS3 571 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 TVP23BQ9NYZ1 205 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 ABRACLQ9P1F3 81 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 ZNF624Q9P2J8 865 aaPredicted RBP9.72□□□□□ -0.85
CHFR-219ENST00000541341 NLKQ9UBE8 527 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 COMMD3Q9UBI1 195 aa9.72□□□□□ -0.85
CHFR-219ENST00000541341 DKK4Q9UBT3 224 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms