RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 KLHL20Q9Y2M5 609 aa7.74□□□□□ -1.17
CHD4-208ENST00000540960 GPC6Q9Y625 555 aaPredicted RBP7.74□□□□□ -1.17
CHD4-208ENST00000540960 ZANQ9Y493 2812 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 LOC100130705A0A1B0GUX0 176 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 HTR3EA5X5Y0 456 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 A6NHS1 94 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 GLOD5A6NK44 160 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 H3BNH8 94 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 PDLIM1O00151 329 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 MASP2O00187 686 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 P2RX6O15547 441 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 CHST10O43529 356 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 STX11O75558 287 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 OR2B3O76000 313 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 CCNB2O95067 398 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 GADD45GO95257 159 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 TIAF1O95411 115 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 B3GALT4O96024 378 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 DBIP07108 87 aaKnown RBP7.73□□□□□ -1.17
CHD4-208ENST00000540960 FESP07332 822 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 NUDT7P0C024 238 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 ANKRD34CP0C6C1 535 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 CCNYL3P0C7X3 344 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 OR12D1P0DN82 309 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 PVRP15151 417 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 GSTM3P21266 225 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 NT5EP21589 574 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 AQP1P29972 269 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 XCR1P46094 333 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 GABARAPL2P60520 117 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 SPIBQ01892 262 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 SLC13A2Q13183 592 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 RUNX2Q13950 521 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 LASP1Q14847 261 aaKnown RBP7.73□□□□□ -1.17
CHD4-208ENST00000540960 MICAQ29983 383 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 ARHGAP11BQ3KRB8 267 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 AP1ARQ63HQ0 302 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 FRMPD2BQ6IN97 320 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 HEPHL1Q6MZM0 1159 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 MFSD12Q6NUT3 480 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 FAHD1Q6P587 224 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 DHRS4L2Q6PKH6 230 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 TMEM107Q6UX40 140 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 IGFL3Q6UXB1 125 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 USP51Q70EK9 711 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 TMEM200AQ86VY9 491 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 CA13Q8N1Q1 262 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 PARP8Q8N3A8 854 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 OR9A2Q8NGT5 310 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 HDAC2Q92769 488 aaKnown RBP7.73□□□□□ -1.17
CHD4-208ENST00000540960 MAGED4Q96JG8 741 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 COL21A1Q96P44 957 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 DGAT2Q96PD7 388 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 OR7D2Q96RA2 312 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 MAP3K3Q99759 626 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 G6PC3Q9BUM1 346 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 PRRG3Q9BZD7 231 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 AICDAQ9GZX7 198 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 HOXD1Q9GZZ0 328 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 PRTFDC1Q9NRG1 225 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 PAPOLBQ9NRJ5 636 aaKnown RBP7.73□□□□□ -1.17
CHD4-208ENST00000540960 C14orf105Q9NVL8 296 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 FAM118AQ9NWS6 357 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 MGAT4BQ9UQ53 548 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 TPRKBQ9Y3C4 175 aa7.73□□□□□ -1.17
CHD4-208ENST00000540960 HIVEP2P31629 2446 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 A0A1W2PRQ8 180 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 C21orf140B9A014 251 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 TMEM150CB9EJG8 249 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 hCG_2039718K7EN88 272 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 M0R3G1 203 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 AP3D1O14617 1153 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 PRAMEF2O60811 474 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 UGT2B17O75795 530 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 SMNDC1O75940 238 aaKnown RBP eCLIP7.72□□□□□ -1.17
CHD4-208ENST00000540960 ADAP00813 363 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 H1F0P07305 194 aaKnown RBP7.72□□□□□ -1.17
CHD4-208ENST00000540960 CCDC159P0C7I6 412 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 NELFEP18615 380 aaKnown RBP7.72□□□□□ -1.17
CHD4-208ENST00000540960 MC3RP41968 323 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 DCAF7P61962 342 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 IGLV3-21P80748 117 aaPredicted RBP7.72□□□□□ -1.17
CHD4-208ENST00000540960 DGCR6Q14129 220 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 NKG7Q16617 165 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 LIN52Q52LA3 116 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 ZNF628Q5EBL2 1059 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 ZNF311Q5JNZ3 666 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 DCST1Q5T197 706 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 KDM4DQ6B0I6 523 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 RPTNQ6XPR3 784 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 NCCRP1Q6ZVX7 275 aaPredicted RBP7.72□□□□□ -1.17
CHD4-208ENST00000540960 RRM2BQ7LG56 351 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 VTCN1Q7Z7D3 282 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 RANBP3LQ86VV4 465 aaPredicted RBP7.72□□□□□ -1.17
CHD4-208ENST00000540960 SLC44A2Q8IWA5 706 aaPredicted RBP7.72□□□□□ -1.17
CHD4-208ENST00000540960 GALNT12Q8IXK2 581 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 CMIPQ8IY22 773 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 ALDH16A1Q8IZ83 802 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 C10orf111Q8N326 155 aa7.72□□□□□ -1.17
CHD4-208ENST00000540960 ZNF786Q8N393 782 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms