RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	CCDC88C	Q9P219	2028 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	GREB1	Q4ZG55	1949 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SNTN	A6NMZ2	147 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	TEX46	H3BTG2	121 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SHOX	O15266	292 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	DPM1	O60762	260 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	LILRB5	O75023	590 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	LALBA	P00709	142 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	BCHE	P06276	602 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	CEACAM5	P06731	702 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	OR12D1	P0DN82	309 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PTGER1	P34995	402 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	BDKRB1	P46663	353 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ID4	P47928	161 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	LIMS1	P48059	325 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	CCT3	P49368	545 aa	Known RBP	5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SRP9	P49458	86 aa	Known RBP	5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	CLDN20	P56880	219 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	TAS2R50	P59544	299 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	GINS1	Q14691	196 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	KLHL22	Q53GT1	634 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	DCST1	Q5T197	706 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ANXA8L1	Q5VT79	327 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	YOD1	Q5VVQ6	348 aa	Predicted RBP	5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	HLA-DQA1	Q5Y7H0	255 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	METTL2B	Q6P1Q9	378 aa	Known RBP	5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	HSDL2	Q6YN16	418 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PLEKHM3	Q6ZWE6	761 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	USP53	Q70EK8	1073 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ABHD13	Q7L211	337 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	COMMD7	Q86VX2	200 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	MARCH9	Q86YJ5	346 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	C2orf73	Q8N5S3	287 aa	Predicted RBP	5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	GALNT11	Q8NCW6	608 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	OR4D11	Q8NGI4	311 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	WDR20	Q8TBZ3	569 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SLC9A6	Q92581	669 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	OTULIN	Q96BN8	352 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	BMF	Q96LC9	184 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	B3GNT4	Q9C0J1	378 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PITHD1	Q9GZP4	211 aa	Predicted RBP	5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	MED28	Q9H204	178 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SLC39A1	Q9NY26	324 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	B3GNT2	Q9NY97	397 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	C5AR2	Q9P296	337 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ZNF282	Q9UDV7	671 aa	Predicted RBP	5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	BTNL2	Q9UIR0	455 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	HCN2	Q9UL51	889 aa		5.3	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	MYO16	Q9Y6X6	1858 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	TLCD2	A6NGC4	264 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783		H3BUI4	141 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SLC30A4	O14863	429 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	CH25H	O95992	272 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	GP1BA	P07359	652 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	FAM157B	P0CG42	384 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	CEACAM1	P13688	526 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	RHCE	P18577	417 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	CXCL3	P19876	107 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	M6PR	P20645	277 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PPP2R1B	P30154	601 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ALDH9A1	P49189	494 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PER3	P56645	1201 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	RPS15A	P62244	130 aa	Known RBP	5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	MESP2	Q0VG99	397 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ZMYND11	Q15326	602 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	GGTA1P	Q4G0N0	100 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	CRB2	Q5IJ48	1285 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	CLEC12A	Q5QGZ9	265 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	METRNL	Q641Q3	311 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	AGTRAP	Q6RW13	159 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	TEX261	Q6UWH6	196 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	RNF165	Q6ZSG1	346 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	TMPRSS11B	Q86T26	416 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	CLDN22	Q8N7P3	220 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PLA2G15	Q8NCC3	412 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	OR7G3	Q8NG95	312 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	GPBAR1	Q8TDU6	330 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	TTC9	Q92623	222 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	CCDC74A	Q96AQ1	378 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	HYLS1	Q96M11	299 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	OR4K3	Q96R72	315 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	TMEM43	Q9BTV4	400 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ACTR10	Q9NZ32	417 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	EIF3K	Q9UBQ5	218 aa	Known RBP	5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	RABL2B	Q9UNT1	228 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SLC9A8	Q9Y2E8	581 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783		U3KQ87	197 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PTPRD	P23468	1912 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	TMEM150C	B9EJG8	249 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SIGLEC6	O43699	453 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	MT-CO3	P00414	261 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	HRG	P04196	525 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	TP53	P04637	393 aa	Predicted RBP	5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PIP	P12273	146 aa	Predicted RBP	5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PNLIP	P16233	465 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	CEL	P19835	753 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PPIB	P23284	216 aa	Known RBP	5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PRPH2	P23942	346 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PTX3	P26022	381 aa	Predicted RBP	5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	CTSC	P53634	463 aa		5.29	□□□□□ -1.56

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