RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 NXF3Q9H4D5 531 aaKnown RBP2.14□□□□□ -2.07
MDM2-227ENST00000540709 SYTL2Q9HCH5 934 aa2.14□□□□□ -2.07
MDM2-227ENST00000540709 TRPV5Q9NQA5 729 aa2.14□□□□□ -2.07
MDM2-227ENST00000540709 NANSQ9NR45 359 aa2.14□□□□□ -2.07
MDM2-227ENST00000540709 OR1A1Q9P1Q5 309 aa2.14□□□□□ -2.07
MDM2-227ENST00000540709 CRLS1Q9UJA2 301 aa2.14□□□□□ -2.07
MDM2-227ENST00000540709 PLA2G4CQ9UP65 541 aa2.14□□□□□ -2.07
MDM2-227ENST00000540709 PSG11Q9UQ72 335 aa2.14□□□□□ -2.07
MDM2-227ENST00000540709 PLEKHG1Q9ULL1 1385 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 WASHC1A8K0Z3 465 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 H0YL77 283 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 TMX2-CTNND1H3BSU7 103 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 LGALS8O00214 317 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 ZNF264O43296 627 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 UQCRBP14927 111 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 RPS2P15880 293 aaKnown RBP2.13□□□□□ -2.07
MDM2-227ENST00000540709 TSPAN8P19075 237 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 HTR1EP28566 365 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 PRDX2P32119 198 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 HPDP32754 393 aaPredicted RBP2.13□□□□□ -2.07
MDM2-227ENST00000540709 GPC3P51654 580 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 NUP107P57740 925 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 MRPS11P82912 194 aaKnown RBP2.13□□□□□ -2.07
MDM2-227ENST00000540709 VLDLRP98155 873 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 BDH1Q02338 343 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 ZNF154Q13106 437 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 KCTD19Q17RG1 926 aaPredicted RBP2.13□□□□□ -2.07
MDM2-227ENST00000540709 PAGE3Q5JUK9 113 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 C1QTNF12Q5T7M4 302 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 STAC2Q6ZMT1 411 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 C20orf203Q8NBC4 194 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 OR2AP1Q8NGE2 309 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 OR2A12Q8NGT7 310 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 NEIL3Q8TAT5 605 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 ARNTL2Q8WYA1 636 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 MYDGFQ969H8 173 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 SDSLQ96GA7 329 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 TBC1D10AQ9BXI6 508 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 COMMD4Q9H0A8 199 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 KAT8Q9H7Z6 458 aaKnown RBP2.13□□□□□ -2.07
MDM2-227ENST00000540709 APMAPQ9HDC9 416 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 C1orf123Q9NWV4 160 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.13□□□□□ -2.07
MDM2-227ENST00000540709 SPRR3Q9UBC9 169 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 IL19Q9UHD0 177 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 PRG3Q9Y2Y8 225 aaPredicted RBP2.13□□□□□ -2.07
MDM2-227ENST00000540709 WDR45Q9Y484 360 aa2.13□□□□□ -2.07
MDM2-227ENST00000540709 SPAG9O60271 1321 aaKnown RBP2.13□□□□□ -2.07
MDM2-227ENST00000540709 FAM166BA8MTA8 275 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 ICOSLGO75144 302 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 WISP3O95389 354 aaPredicted RBP2.12□□□□□ -2.07
MDM2-227ENST00000540709 KLF8O95600 359 aaPredicted RBP2.12□□□□□ -2.07
MDM2-227ENST00000540709 CHRNA1P02708 482 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 SLC4A1P02730 911 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 ANXA4P09525 319 aaPredicted RBP2.12□□□□□ -2.07
MDM2-227ENST00000540709 THRBP10828 461 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 SFNP31947 248 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 HSPA1LP34931 641 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 GCKP35557 465 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 NUDT1P36639 197 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 WASHC5Q12768 1159 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 UNC119Q13432 240 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 PDIA5Q14554 519 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 AANATQ16613 207 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 TOR1AIP1Q5JTV8 583 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 WDR88Q6ZMY6 472 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 TMEM26Q6ZUK4 368 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 HSD11B1LQ7Z5J1 315 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 RABEPKQ7Z6M1 372 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 SYVN1Q86TM6 617 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 SERPINA9Q86WD7 417 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 TMEM252Q8N6L7 170 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 SUMF2Q8NBJ7 301 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 STKLD1Q8NE28 680 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 GIPC3Q8TF64 312 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 TRUB1Q8WWH5 349 aaKnown RBP2.12□□□□□ -2.07
MDM2-227ENST00000540709 FCGR1BQ92637 280 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 SLC35E1Q96K37 410 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 MBOAT4Q96T53 435 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 PLA2G2FQ9BZM2 168 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 XPO4Q9C0E2 1151 aaKnown RBP2.12□□□□□ -2.07
MDM2-227ENST00000540709 THAP9Q9H5L6 903 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 CAB39LQ9H9S4 337 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 LPAR2Q9HBW0 351 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 CNOT2Q9NZN8 540 aaKnown RBP2.12□□□□□ -2.07
MDM2-227ENST00000540709 P2RX2Q9UBL9 471 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 DCDC2Q9UHG0 476 aa2.12□□□□□ -2.07
MDM2-227ENST00000540709 UBQLN1Q9UMX0 589 aaKnown RBP2.12□□□□□ -2.07
MDM2-227ENST00000540709 WASH3PC4AMC7 463 aa2.11□□□□□ -2.07
MDM2-227ENST00000540709 TRAF3IP2O43734 574 aaPredicted RBP2.11□□□□□ -2.07
MDM2-227ENST00000540709 ZNF324O75467 553 aaPredicted RBP2.11□□□□□ -2.07
MDM2-227ENST00000540709 IGHV4-34P06331 123 aa2.11□□□□□ -2.07
MDM2-227ENST00000540709 GCFC2P16383 781 aaKnown RBP2.11□□□□□ -2.07
MDM2-227ENST00000540709 ATP5A1P25705 553 aaKnown RBP2.11□□□□□ -2.07
MDM2-227ENST00000540709 PRDX6P30041 224 aa2.11□□□□□ -2.07
MDM2-227ENST00000540709 KIR2DS2P43631 304 aa2.11□□□□□ -2.07
MDM2-227ENST00000540709 EGFEM1PQ0D2K5 195 aa2.11□□□□□ -2.07
MDM2-227ENST00000540709 TFDP1Q14186 410 aa2.11□□□□□ -2.07
MDM2-227ENST00000540709 GAMTQ14353 236 aa2.11□□□□□ -2.07
MDM2-227ENST00000540709 ASPHD2Q6ICH7 369 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms