RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 SMPDL3BQ92485 455 aa18.87■□□□□ 0.61
CHFR-217ENST00000540537 ZBTB8AQ96BR9 441 aa18.87■□□□□ 0.61
CHFR-217ENST00000540537 MOAP1Q96BY2 351 aa18.87■□□□□ 0.61
CHFR-217ENST00000540537 CHMP6Q96FZ7 201 aa18.87■□□□□ 0.61
CHFR-217ENST00000540537 ZNF845Q96IR2 970 aaPredicted RBP18.87■□□□□ 0.61
CHFR-217ENST00000540537 DUSP26Q9BV47 211 aa18.87■□□□□ 0.61
CHFR-217ENST00000540537 RNF122Q9H9V4 155 aa18.87■□□□□ 0.61
CHFR-217ENST00000540537 NOP53Q9NZM5 478 aaKnown RBP18.87■□□□□ 0.61
CHFR-217ENST00000540537 FAF1Q9UNN5 650 aaPredicted RBP18.87■□□□□ 0.61
CHFR-217ENST00000540537 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.87■□□□□ 0.61
CHFR-217ENST00000540537 ITPR3Q14573 2671 aa18.87■□□□□ 0.61
CHFR-217ENST00000540537 WDR91A4D1P6 747 aa18.86■□□□□ 0.61
CHFR-217ENST00000540537 SHISA8B8ZZ34 492 aa18.86■□□□□ 0.61
CHFR-217ENST00000540537 MYZAPP0CAP1 466 aa18.86■□□□□ 0.61
CHFR-217ENST00000540537 FCGR2AP12318 317 aa18.86■□□□□ 0.61
CHFR-217ENST00000540537 ATP6V1C1P21283 382 aa18.86■□□□□ 0.61
CHFR-217ENST00000540537 KIR2DL2P43627 348 aaPredicted RBP18.86■□□□□ 0.61
CHFR-217ENST00000540537 ZNF41P51814 821 aaPredicted RBP18.86■□□□□ 0.61
CHFR-217ENST00000540537 CLDN8P56748 225 aa18.86■□□□□ 0.61
CHFR-217ENST00000540537 PON3Q15166 354 aa18.86■□□□□ 0.61
CHFR-217ENST00000540537 PDCD2Q16342 344 aaPredicted RBP18.86■□□□□ 0.61
CHFR-217ENST00000540537 PLPPR5Q32ZL2 321 aa18.86■□□□□ 0.61
CHFR-217ENST00000540537 TNFAIP8L3Q5GJ75 292 aa18.86■□□□□ 0.61
CHFR-217ENST00000540537 VWA1Q6PCB0 445 aa18.86■□□□□ 0.61
CHFR-217ENST00000540537 GGNQ86UU5 652 aa18.86■□□□□ 0.61
CHFR-217ENST00000540537 KIRREL3Q8IZU9 778 aa18.86■□□□□ 0.61
CHFR-217ENST00000540537 ZNF781Q8N8C0 355 aa18.86■□□□□ 0.61
CHFR-217ENST00000540537 ADAMTS15Q8TE58 950 aa18.86■□□□□ 0.61
CHFR-217ENST00000540537 FOXC2Q99958 501 aa18.86■□□□□ 0.61
CHFR-217ENST00000540537 LIME1Q9H400 295 aa18.86■□□□□ 0.61
CHFR-217ENST00000540537 MED17Q9NVC6 651 aa18.86■□□□□ 0.61
CHFR-217ENST00000540537 GPATCH2Q9NW75 528 aa18.86■□□□□ 0.61
CHFR-217ENST00000540537 RAP2CQ9Y3L5 183 aa18.86■□□□□ 0.61
CHFR-217ENST00000540537 ACTL7BQ9Y614 415 aa18.86■□□□□ 0.61
CHFR-217ENST00000540537 SH3D21A4FU49 640 aa18.85■□□□□ 0.61
CHFR-217ENST00000540537 SMNDC1O75940 238 aaKnown RBP eCLIP18.85■□□□□ 0.61
CHFR-217ENST00000540537 CPOXP36551 454 aa18.85■□□□□ 0.61
CHFR-217ENST00000540537 GUSBP1Q15486 140 aa18.85■□□□□ 0.61
CHFR-217ENST00000540537 CD226Q15762 336 aa18.85■□□□□ 0.61
CHFR-217ENST00000540537 SGCBQ16585 318 aa18.85■□□□□ 0.61
CHFR-217ENST00000540537 DCST2Q5T1A1 773 aa18.85■□□□□ 0.61
CHFR-217ENST00000540537 FBXW10Q5XX13 1052 aa18.85■□□□□ 0.61
CHFR-217ENST00000540537 BHLHB9Q6PI77 547 aa18.85■□□□□ 0.61
CHFR-217ENST00000540537 BTLAQ7Z6A9 289 aa18.85■□□□□ 0.61
CHFR-217ENST00000540537 MTERF4Q7Z6M4 381 aaKnown RBP18.85■□□□□ 0.61
CHFR-217ENST00000540537 WDR75Q8IWA0 830 aaKnown RBP18.85■□□□□ 0.61
CHFR-217ENST00000540537 B4GALNT2Q8NHY0 566 aa18.85■□□□□ 0.61
CHFR-217ENST00000540537 PGM2Q96G03 612 aa18.85■□□□□ 0.61
CHFR-217ENST00000540537 SH3YL1Q96HL8 342 aaPredicted RBP18.85■□□□□ 0.61
CHFR-217ENST00000540537 HOXD1Q9GZZ0 328 aa18.85■□□□□ 0.61
CHFR-217ENST00000540537 CXXC4Q9H2H0 198 aa18.85■□□□□ 0.61
CHFR-217ENST00000540537 ZNF395Q9H8N7 513 aaPredicted RBP18.85■□□□□ 0.61
CHFR-217ENST00000540537 AKTIPQ9H8T0 292 aa18.85■□□□□ 0.61
CHFR-217ENST00000540537 CCM2LQ9NUG4 571 aaPredicted RBP18.85■□□□□ 0.61
CHFR-217ENST00000540537 PAQR5Q9NXK6 330 aaPredicted RBP18.85■□□□□ 0.61
CHFR-217ENST00000540537 PRRC2AP48634 2157 aaKnown RBP18.85■□□□□ 0.61
CHFR-217ENST00000540537 EIF1AYO14602 144 aaKnown RBP18.84■□□□□ 0.61
CHFR-217ENST00000540537 CFLARO15519 480 aa18.84■□□□□ 0.61
CHFR-217ENST00000540537 TUBBP07437 444 aa18.84■□□□□ 0.61
CHFR-217ENST00000540537 DNASE1P24855 282 aa18.84■□□□□ 0.61
CHFR-217ENST00000540537 PSMA4P25789 261 aaKnown RBP18.84■□□□□ 0.61
CHFR-217ENST00000540537 RAC1P63000 192 aa18.84■□□□□ 0.61
CHFR-217ENST00000540537 HBA1P69905 142 aa18.84■□□□□ 0.61
CHFR-217ENST00000540537 SIRPAP78324 504 aa18.84■□□□□ 0.61
CHFR-217ENST00000540537 CEP85LQ5SZL2 805 aa18.84■□□□□ 0.61
CHFR-217ENST00000540537 CROCCP2Q86T23 111 aa18.84■□□□□ 0.61
CHFR-217ENST00000540537 ZNF527Q8NB42 609 aa18.84■□□□□ 0.61
CHFR-217ENST00000540537 ADGRG7Q96K78 797 aa18.84■□□□□ 0.61
CHFR-217ENST00000540537 SORT1Q99523 831 aa18.84■□□□□ 0.61
CHFR-217ENST00000540537 CENPHQ9H3R5 247 aa18.84■□□□□ 0.61
CHFR-217ENST00000540537 NDRG3Q9UGV2 375 aa18.84■□□□□ 0.61
CHFR-217ENST00000540537 HAO1Q9UJM8 370 aa18.84■□□□□ 0.61
CHFR-217ENST00000540537 AQP8O94778 261 aa18.83■□□□□ 0.6
CHFR-217ENST00000540537 CGAP01215 116 aa18.83■□□□□ 0.6
CHFR-217ENST00000540537 HRGP04196 525 aa18.83■□□□□ 0.6
CHFR-217ENST00000540537 CD8BP10966 210 aa18.83■□□□□ 0.6
CHFR-217ENST00000540537 CD79BP40259 229 aa18.83■□□□□ 0.6
CHFR-217ENST00000540537 EIF1AXP47813 144 aaKnown RBP18.83■□□□□ 0.6
CHFR-217ENST00000540537 SLC1A6P48664 564 aa18.83■□□□□ 0.6
CHFR-217ENST00000540537 RPL14P50914 215 aaKnown RBP18.83■□□□□ 0.6
CHFR-217ENST00000540537 PGS1Q32NB8 556 aa18.83■□□□□ 0.6
CHFR-217ENST00000540537 KLHL26Q53HC5 615 aa18.83■□□□□ 0.6
CHFR-217ENST00000540537 ZNF474Q6S9Z5 364 aaPredicted RBP18.83■□□□□ 0.6
CHFR-217ENST00000540537 PAMR1Q6UXH9 720 aa18.83■□□□□ 0.6
CHFR-217ENST00000540537 OR10D3Q8NH80 312 aa18.83■□□□□ 0.6
CHFR-217ENST00000540537 OR5AK3PQ8NH89 298 aa18.83■□□□□ 0.6
CHFR-217ENST00000540537 PPP1R36Q96LQ0 422 aa18.83■□□□□ 0.6
CHFR-217ENST00000540537 RNF145Q96MT1 663 aa18.83■□□□□ 0.6
CHFR-217ENST00000540537 NPAS1Q99742 590 aa18.83■□□□□ 0.6
CHFR-217ENST00000540537 C20orf27Q9GZN8 174 aa18.83■□□□□ 0.6
CHFR-217ENST00000540537 OPN3Q9H1Y3 402 aaPredicted RBP18.83■□□□□ 0.6
CHFR-217ENST00000540537 PLEKHA6Q9Y2H5 1048 aa18.83■□□□□ 0.6
CHFR-217ENST00000540537 TESMINQ9Y4I5 508 aa18.83■□□□□ 0.6
CHFR-217ENST00000540537 KCNE3Q9Y6H6 103 aa18.83■□□□□ 0.6
CHFR-217ENST00000540537 MAP1AP78559 2803 aaPredicted RBP18.82■□□□□ 0.6
CHFR-217ENST00000540537 H3BNH8 94 aa18.82■□□□□ 0.6
CHFR-217ENST00000540537 RNASET2O00584 256 aaKnown RBP18.82■□□□□ 0.6
CHFR-217ENST00000540537 ADAMDEC1O15204 470 aa18.82■□□□□ 0.6
CHFR-217ENST00000540537 LINGO3P0C6S8 592 aa18.82■□□□□ 0.6
CHFR-217ENST00000540537 ME2P23368 584 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms