RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 LRRC25Q8N386 305 aaPredicted RBP12.72□□□□□ -0.37
BNIP3-202ENST00000540159 RFLNBQ8N5W9 214 aa12.72□□□□□ -0.37
BNIP3-202ENST00000540159 OR4M2Q8NGB6 313 aa12.72□□□□□ -0.37
BNIP3-202ENST00000540159 ACOT11Q8WXI4 607 aaPredicted RBP12.72□□□□□ -0.37
BNIP3-202ENST00000540159 FGF11Q92914 225 aa12.72□□□□□ -0.37
BNIP3-202ENST00000540159 IFT27Q9BW83 186 aa12.72□□□□□ -0.37
BNIP3-202ENST00000540159 ADAM29Q9UKF5 820 aa12.72□□□□□ -0.37
BNIP3-202ENST00000540159 CBLCQ9ULV8 474 aa12.72□□□□□ -0.37
BNIP3-202ENST00000540159 HCRTR1O43613 425 aa12.71□□□□□ -0.37
BNIP3-202ENST00000540159 CPMP14384 443 aa12.71□□□□□ -0.37
BNIP3-202ENST00000540159 HTR2AP28223 471 aa12.71□□□□□ -0.37
BNIP3-202ENST00000540159 EFNB1P98172 346 aa12.71□□□□□ -0.37
BNIP3-202ENST00000540159 QPRTQ15274 297 aa12.71□□□□□ -0.37
BNIP3-202ENST00000540159 NDUFA9Q16795 377 aa12.71□□□□□ -0.37
BNIP3-202ENST00000540159 TMEM35AQ53FP2 167 aa12.71□□□□□ -0.37
BNIP3-202ENST00000540159 KIAA1324Q6UXG2 1013 aaKnown RBP12.71□□□□□ -0.37
BNIP3-202ENST00000540159 ZNF620Q6ZNG0 422 aa12.71□□□□□ -0.37
BNIP3-202ENST00000540159 OR2T33Q8NG76 320 aa12.71□□□□□ -0.37
BNIP3-202ENST00000540159 FRMD6Q96NE9 622 aa12.71□□□□□ -0.37
BNIP3-202ENST00000540159 ZNF559Q9BR84 538 aa12.71□□□□□ -0.37
BNIP3-202ENST00000540159 PCDHGB2Q9Y5G2 931 aa12.71□□□□□ -0.37
BNIP3-202ENST00000540159 CELSR3Q9NYQ7 3312 aa12.71□□□□□ -0.37
BNIP3-202ENST00000540159 GXYLT2A0PJZ3 443 aa12.71□□□□□ -0.38
BNIP3-202ENST00000540159 J3QLW9 94 aa12.71□□□□□ -0.38
BNIP3-202ENST00000540159 IMPA2O14732 288 aa12.71□□□□□ -0.38
BNIP3-202ENST00000540159 LANCL1O43813 399 aa12.71□□□□□ -0.38
BNIP3-202ENST00000540159 TBX19O60806 448 aa12.71□□□□□ -0.38
BNIP3-202ENST00000540159 GUCY1B2O75343 617 aa12.71□□□□□ -0.38
BNIP3-202ENST00000540159 ZNF19P17023 458 aa12.71□□□□□ -0.38
BNIP3-202ENST00000540159 TYRP1P17643 537 aa12.71□□□□□ -0.38
BNIP3-202ENST00000540159 NDUFV2P19404 249 aa12.71□□□□□ -0.38
BNIP3-202ENST00000540159 EN2P19622 333 aaPredicted RBP12.71□□□□□ -0.38
BNIP3-202ENST00000540159 COL9A1P20849 921 aa12.71□□□□□ -0.38
BNIP3-202ENST00000540159 GABRA5P31644 462 aa12.71□□□□□ -0.38
BNIP3-202ENST00000540159 IFNGR2P38484 337 aa12.71□□□□□ -0.38
BNIP3-202ENST00000540159 SRP9P49458 86 aaKnown RBP12.71□□□□□ -0.38
BNIP3-202ENST00000540159 ANXA11P50995 505 aaKnown RBP12.71□□□□□ -0.38
BNIP3-202ENST00000540159 RPS21P63220 83 aaKnown RBP12.71□□□□□ -0.38
BNIP3-202ENST00000540159 E2F1Q01094 437 aa12.71□□□□□ -0.38
BNIP3-202ENST00000540159 NDUFAF6Q330K2 333 aa12.71□□□□□ -0.38
BNIP3-202ENST00000540159 FBXO42Q6P3S6 717 aa12.71□□□□□ -0.38
BNIP3-202ENST00000540159 GDPGP1Q6ZNW5 385 aa12.71□□□□□ -0.38
BNIP3-202ENST00000540159 RASSF6Q6ZTQ3 369 aa12.71□□□□□ -0.38
BNIP3-202ENST00000540159 PEX5LQ8IYB4 626 aa12.71□□□□□ -0.38
BNIP3-202ENST00000540159 KLHL36Q8N4N3 616 aa12.71□□□□□ -0.38
BNIP3-202ENST00000540159 TTLQ8NG68 377 aa12.71□□□□□ -0.38
BNIP3-202ENST00000540159 FANK1Q8TC84 345 aa12.71□□□□□ -0.38
BNIP3-202ENST00000540159 MYADMQ96S97 322 aa12.71□□□□□ -0.38
BNIP3-202ENST00000540159 RSPH9Q9H1X1 276 aaPredicted RBP12.71□□□□□ -0.38
BNIP3-202ENST00000540159 BEX1Q9HBH7 125 aa12.71□□□□□ -0.38
BNIP3-202ENST00000540159 KCNE5Q9UJ90 142 aa12.71□□□□□ -0.38
BNIP3-202ENST00000540159 A0A1W2PRG6 482 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 FAM47E-STBD1D6RA91 191 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 CASC3O15234 703 aaKnown RBP12.7□□□□□ -0.38
BNIP3-202ENST00000540159 SLC35G6P0C7Q6 338 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 TEAD1P28347 426 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 ACSL1P33121 698 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 ADPRHP54922 357 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 TMEM196Q5HYL7 178 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 VASNQ6EMK4 673 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 ASPGQ86U10 573 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 NATD1Q8N6N6 113 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 COX18Q8N8Q8 333 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 RNF32Q9H0A6 362 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 FN3KQ9H479 309 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 RNF121Q9H920 327 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 CACYBPQ9HB71 228 aaKnown RBP12.7□□□□□ -0.38
BNIP3-202ENST00000540159 GALNT9Q9HCQ5 603 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 NLGN3Q9NZ94 848 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 EXTL2Q9UBQ6 330 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 TMA7Q9Y2S6 64 aaKnown RBP12.7□□□□□ -0.38
BNIP3-202ENST00000540159 TRAV6A0A075B6T7 132 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 SNTNA6NMZ2 147 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 FGF17O60258 216 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 RFPL3O75679 317 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 ELK1P19419 428 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 GRPRP30550 384 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 FXYD6P3P58550 94 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 BNC1Q01954 994 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 ERV3-1Q14264 604 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 GNA13Q14344 377 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 AADACL4Q5VUY2 407 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 XKRXQ6PP77 449 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 TMEM91Q6ZNR0 172 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 METTL27Q8N6F8 245 aaPredicted RBP12.7□□□□□ -0.38
BNIP3-202ENST00000540159 C17orf47Q8NEP4 570 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 OR4N2Q8NGD1 307 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 OR4K14Q8NGD5 310 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 ATF6BQ99941 703 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 ALG8Q9BVK2 526 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 TRAPPC4Q9Y296 219 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 TMEM129A0AVI4 362 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 DAPL1A0PJW8 107 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 FAM171A2A8MVW0 826 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 CT62P0C5K7 136 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 C5AR1P21730 350 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 GABRA3P34903 492 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 MAGEB1P43366 347 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 TPBGQ13641 420 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 DSG2Q14126 1118 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms