RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 MARVELD3Q96A59 401 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 RAD51AP1Q96B01 352 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 RGMAQ96B86 450 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 PINK1Q9BXM7 581 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 DPH1Q9BZG8 443 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 KCNN2Q9H2S1 579 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 BCL2L10Q9HD36 194 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 MARK1Q9P0L2 795 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 ATG4BQ9Y4P1 393 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 DAPL1A0PJW8 107 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 RGS11O94810 467 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 ADRB1P08588 477 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 MC3RP41968 323 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 HCCSP53701 268 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 FXYD6P3P58550 94 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 ST3GAL3Q11203 375 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 SUZ12Q15022 739 aaKnown RBP12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 LTB4RQ15722 352 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 TMEM255AQ5JRV8 349 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 OR4C11Q6IEV9 310 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 RTL4Q6ZR62 310 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 RFLNBQ8N5W9 214 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 ORAI1Q96D31 301 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 OR7D2Q96RA2 312 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 OR51V1Q9H2C8 321 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 CLEC4MQ9H2X3 399 aaPredicted RBP12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 XKR8Q9H6D3 395 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 C12orf4Q9NQ89 552 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 SLC13A4Q9UKG4 626 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 ZMIZ1Q9ULJ6 1067 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 NUBP2Q9Y5Y2 271 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 WNT6Q9Y6F9 365 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 A0A1W2PRG6 482 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 J3QLW9 94 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 ZNF593O00488 134 aaPredicted RBP12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 CCL16O15467 120 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 PAPLNO95428 1278 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 GYPBP06028 91 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 ZNF19P17023 458 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 PAICSP22234 425 aaKnown RBP12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 OR12D2P58182 307 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 SIM1P81133 766 aaPredicted RBP12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 TAGLNQ01995 201 aaKnown RBP12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 Q6ZTK2 550 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 FTMTQ8N4E7 242 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 OR2T33Q8NG76 320 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 RIT1Q92963 219 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 IRF7Q92985 503 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 NXPE2Q96DL1 559 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 COQ10AQ96MF6 247 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 SPATA5L1Q9BVQ7 753 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 B3GNT4Q9C0J1 378 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 UBQLN2Q9UHD9 624 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 SLC7A7Q9UM01 511 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 A0A0A6YYD5 115 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 A0A1W2PR48 441 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 MAN2B1O00754 1011 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 LATO43561 262 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 TBX19O60806 448 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 PQBP1O60828 265 aaKnown RBP12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 NFATC1O95644 943 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 FPR3P25089 353 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 NOS3P29474 1203 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 IFNGR2P38484 337 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 MAP2K6P52564 334 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 PDX1P52945 283 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 RGS8P57771 180 aaPredicted RBP12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 RPS7P62081 194 aaKnown RBP12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 C9orf64Q5T6V5 341 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 IQCF2Q8IXL9 164 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 LINC01555Q8NAE3 123 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 OR9A2Q8NGT5 310 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 ABHD4Q8TB40 342 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 PMEPA1Q969W9 287 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 OR2M2Q96R28 347 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 MCHR1Q99705 422 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 ZDHHC4Q9NPG8 344 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 C20orf141Q9NUB4 165 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 NFKBIL1Q9UBC1 381 aaPredicted RBP12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 SCN2AQ99250 2005 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 IGKV1-8A0A0C4DH67 115 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 GMDSO60547 372 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 H2AFB2P0C5Z0 115 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 SULT1A3P0DMM9 295 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 SULT1A4P0DMN0 295 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 GAAP10253 952 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 ATF1P18846 271 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 CCR8P51685 355 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 HSF2Q03933 536 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 GALEQ14376 348 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 FAM46CQ5VWP2 391 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 NIPAL3Q6P499 406 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 NLRC3Q7RTR2 1065 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 SSX6Q7RTT6 188 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 CYB561A3Q8NBI2 242 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 OR2L2Q8NH16 312 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 PFN4Q8NHR9 129 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 SLC41A3Q96GZ6 507 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 C4orf36Q96KX1 117 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 DDOQ99489 341 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms