RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 ADGRF3Q8IZF5 1079 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 CLECL1Q8IZS7 167 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 TAGAPQ8N103 731 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 ZNF557Q8N988 423 aaPredicted RBP7.16□□□□□ -1.26
CCDC60-204ENST00000539847 TMEM145Q8NBT3 493 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 ZNF485Q8NCK3 441 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 FBXO15Q8NCQ5 510 aaPredicted RBP7.16□□□□□ -1.26
CCDC60-204ENST00000539847 BVESQ8NE79 360 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 OR8H1Q8NGG4 311 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 OR8K5Q8NH50 307 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 VANGL1Q8TAA9 524 aaPredicted RBP7.16□□□□□ -1.26
CCDC60-204ENST00000539847 ZNF431Q8TF32 576 aaPredicted RBP7.16□□□□□ -1.26
CCDC60-204ENST00000539847 TM9SF4Q92544 642 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 ELMO1Q92556 727 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 UCN3Q969E3 161 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 WBP2Q969T9 261 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 OTULINQ96BN8 352 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 NXPE2Q96DL1 559 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 MYEOVQ96EZ4 313 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 TRMT61AQ96FX7 289 aaKnown RBP7.16□□□□□ -1.26
CCDC60-204ENST00000539847 ZNF764Q96H86 408 aaPredicted RBP7.16□□□□□ -1.26
CCDC60-204ENST00000539847 LRIG1Q96JA1 1093 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 CCDC74BQ96LY2 380 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 BBC3Q96PG8 261 aaPredicted RBP7.16□□□□□ -1.26
CCDC60-204ENST00000539847 ATF6BQ99941 703 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 BOCQ9BWV1 1114 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 LGR4Q9BXB1 951 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 PRRG3Q9BZD7 231 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 POLR2J3Q9H1A7 115 aaKnown RBP7.16□□□□□ -1.26
CCDC60-204ENST00000539847 MED28Q9H204 178 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 GHITMQ9H3K2 345 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 MYNNQ9NPC7 610 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 CYSLTR2Q9NS75 346 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 MCUBQ9NWR8 336 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 CLEC2DQ9UHP7 191 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 KIF25Q9UIL4 384 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 SCML1Q9UN30 329 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 NCKAP1Q9Y2A7 1128 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.16□□□□□ -1.26
CCDC60-204ENST00000539847 OR51B4Q9Y5P0 310 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 NUBP2Q9Y5Y2 271 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 CEP192Q8TEP8 1941 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 PLXNB3Q9ULL4 1909 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 COL6A6A6NMZ7 2263 aa7.16□□□□□ -1.26
CCDC60-204ENST00000539847 PRAMEF33A0A0G2JMD5 474 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 A0A1W2PRB8 838 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 WASH3PC4AMC7 463 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 TRIM77I1YAP6 450 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 CBX4O00257 560 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 AKR7A2O43488 359 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 CHP2O43745 196 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 TSPAN3O60637 253 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 PRAMEF10O60809 474 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 SLCO2B1O94956 709 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 CSF2P04141 144 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 IFNA16P05015 189 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 H1F0P07305 194 aaKnown RBP7.15□□□□□ -1.26
CCDC60-204ENST00000539847 RRASP10301 218 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 IRF1P10914 325 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 ANXA3P12429 323 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 CD27P26842 260 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 STOMP27105 288 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 APEX1P27695 318 aaKnown RBP7.15□□□□□ -1.26
CCDC60-204ENST00000539847 CCR7P32248 378 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 PTGS2P35354 604 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 HNF1BP35680 557 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 MMP12P39900 470 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 SOX3P41225 446 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 MTNR1BP49286 362 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 INPP1P49441 399 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 SMSP52788 366 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 RAB14P61106 215 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 ARF5P84085 180 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 BCL2L1Q07817 233 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 DOC2AQ14183 400 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 ZNF234Q14588 700 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 TRAM1Q15629 374 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 ZXDCQ2QGD7 858 aaPredicted RBP7.15□□□□□ -1.26
CCDC60-204ENST00000539847 MINDY4Q4G0A6 757 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 TOR2AQ5JU69 321 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 LIPKQ5VXJ0 399 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 FAM205BPQ63HN1 556 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 ZNF787Q6DD87 383 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 FAAH2Q6GMR7 532 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 FAM71E1Q6IPT2 247 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 CXorf57Q6NSI4 855 aaKnown RBP7.15□□□□□ -1.26
CCDC60-204ENST00000539847 RETSATQ6NUM9 610 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 FAM151BQ6UXP7 276 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 BAIAP2L2Q6UXY1 529 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 FGD2Q7Z6J4 655 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 GALNT10Q86SR1 603 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 LUZP2Q86TE4 346 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 TPRA1Q86W33 373 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 CLDN19Q8N6F1 224 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 ARIH2OSQ8N7S6 290 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 DCAF4L2Q8NA75 395 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 UXS1Q8NBZ7 420 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 ATP6V1C2Q8NEY4 427 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 OR7G3Q8NG95 312 aa7.15□□□□□ -1.26
CCDC60-204ENST00000539847 OR9Q2Q8NGE9 314 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms