RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 KRT16P08779 473 aa19.96■□□□□ 0.79
SCARB1-206ENST00000539320 PRPS1L1P21108 318 aa19.96■□□□□ 0.79
SCARB1-206ENST00000539320 ATP6V1C1P21283 382 aa19.96■□□□□ 0.79
SCARB1-206ENST00000539320 CD79BP40259 229 aa19.96■□□□□ 0.79
SCARB1-206ENST00000539320 EIF1AXP47813 144 aaKnown RBP19.96■□□□□ 0.79
SCARB1-206ENST00000539320 CD226Q15762 336 aa19.96■□□□□ 0.79
SCARB1-206ENST00000539320 SGCBQ16585 318 aa19.96■□□□□ 0.79
SCARB1-206ENST00000539320 PLPPR5Q32ZL2 321 aa19.96■□□□□ 0.79
SCARB1-206ENST00000539320 LSM12Q3MHD2 195 aaKnown RBP19.96■□□□□ 0.79
SCARB1-206ENST00000539320 SFXN5Q8TD22 340 aa19.96■□□□□ 0.79
SCARB1-206ENST00000539320 ACTRT2Q8TDY3 377 aa19.96■□□□□ 0.79
SCARB1-206ENST00000539320 ZBTB8AQ96BR9 441 aa19.96■□□□□ 0.79
SCARB1-206ENST00000539320 MBD6Q96DN6 1003 aa19.96■□□□□ 0.79
SCARB1-206ENST00000539320 PGM2Q96G03 612 aa19.96■□□□□ 0.79
SCARB1-206ENST00000539320 ALPK1Q96QP1 1244 aa19.96■□□□□ 0.79
SCARB1-206ENST00000539320 PRPF18Q99633 342 aaKnown RBP19.96■□□□□ 0.79
SCARB1-206ENST00000539320 ACTRT3Q9BYD9 372 aa19.96■□□□□ 0.79
SCARB1-206ENST00000539320 GIN1Q9NXP7 522 aa19.96■□□□□ 0.79
SCARB1-206ENST00000539320 FAF1Q9UNN5 650 aaPredicted RBP19.96■□□□□ 0.79
SCARB1-206ENST00000539320 EIF3LQ9Y262 564 aaKnown RBP19.96■□□□□ 0.79
SCARB1-206ENST00000539320 ACANP16112 2415 aa19.95■□□□□ 0.78
SCARB1-206ENST00000539320 CASKO14936 926 aa19.95■□□□□ 0.78
SCARB1-206ENST00000539320 CTIFO43310 598 aaKnown RBP19.95■□□□□ 0.78
SCARB1-206ENST00000539320 RAF1P04049 648 aa19.95■□□□□ 0.78
SCARB1-206ENST00000539320 SERPINE1P05121 402 aa19.95■□□□□ 0.78
SCARB1-206ENST00000539320 CCT3P49368 545 aaKnown RBP19.95■□□□□ 0.78
SCARB1-206ENST00000539320 ZNF844Q08AG5 666 aa19.95■□□□□ 0.78
SCARB1-206ENST00000539320 FAM27E3Q08E93 113 aa19.95■□□□□ 0.78
SCARB1-206ENST00000539320 MAD2L1Q13257 205 aaPredicted RBP19.95■□□□□ 0.78
SCARB1-206ENST00000539320 GUSBP1Q15486 140 aa19.95■□□□□ 0.78
SCARB1-206ENST00000539320 PPP4R4Q6NUP7 873 aa19.95■□□□□ 0.78
SCARB1-206ENST00000539320 ZNF474Q6S9Z5 364 aaPredicted RBP19.95■□□□□ 0.78
SCARB1-206ENST00000539320 CAMKMTQ7Z624 323 aa19.95■□□□□ 0.78
SCARB1-206ENST00000539320 WDR75Q8IWA0 830 aaKnown RBP19.95■□□□□ 0.78
SCARB1-206ENST00000539320 RIMKLAQ8IXN7 391 aa19.95■□□□□ 0.78
SCARB1-206ENST00000539320 B4GALNT2Q8NHY0 566 aa19.95■□□□□ 0.78
SCARB1-206ENST00000539320 ADAMTS15Q8TE58 950 aa19.95■□□□□ 0.78
SCARB1-206ENST00000539320 MOAP1Q96BY2 351 aa19.95■□□□□ 0.78
SCARB1-206ENST00000539320 COQ8BQ96D53 544 aa19.95■□□□□ 0.78
SCARB1-206ENST00000539320 RNF145Q96MT1 663 aa19.95■□□□□ 0.78
SCARB1-206ENST00000539320 BHLHE41Q9C0J9 482 aaPredicted RBP19.95■□□□□ 0.78
SCARB1-206ENST00000539320 PLEKHF2Q9H8W4 249 aa19.95■□□□□ 0.78
SCARB1-206ENST00000539320 RGS16O15492 202 aaPredicted RBP19.94■□□□□ 0.78
SCARB1-206ENST00000539320 AQP8O94778 261 aa19.94■□□□□ 0.78
SCARB1-206ENST00000539320 ATE1O95260 518 aa19.94■□□□□ 0.78
SCARB1-206ENST00000539320 CD8BP10966 210 aa19.94■□□□□ 0.78
SCARB1-206ENST00000539320 G6PDP11413 515 aa19.94■□□□□ 0.78
SCARB1-206ENST00000539320 POU2F1P14859 743 aa19.94■□□□□ 0.78
SCARB1-206ENST00000539320 CCKARP32238 428 aa19.94■□□□□ 0.78
SCARB1-206ENST00000539320 C21orf58P58505 322 aa19.94■□□□□ 0.78
SCARB1-206ENST00000539320 DCST2Q5T1A1 773 aa19.94■□□□□ 0.78
SCARB1-206ENST00000539320 OR10D3Q8NH80 312 aa19.94■□□□□ 0.78
SCARB1-206ENST00000539320 NUDT8Q8WV74 236 aa19.94■□□□□ 0.78
SCARB1-206ENST00000539320 ADGRG7Q96K78 797 aa19.94■□□□□ 0.78
SCARB1-206ENST00000539320 ZIM3Q96PE6 472 aa19.94■□□□□ 0.78
SCARB1-206ENST00000539320 NPAS1Q99742 590 aa19.94■□□□□ 0.78
SCARB1-206ENST00000539320 DUSP26Q9BV47 211 aa19.94■□□□□ 0.78
SCARB1-206ENST00000539320 PRRG4Q9BZD6 226 aa19.94■□□□□ 0.78
SCARB1-206ENST00000539320 GPATCH2Q9NW75 528 aa19.94■□□□□ 0.78
SCARB1-206ENST00000539320 PAQR5Q9NXK6 330 aaPredicted RBP19.94■□□□□ 0.78
SCARB1-206ENST00000539320 ASIC5Q9NY37 505 aa19.94■□□□□ 0.78
SCARB1-206ENST00000539320 NOP53Q9NZM5 478 aaKnown RBP19.94■□□□□ 0.78
SCARB1-206ENST00000539320 PROCRQ9UNN8 238 aa19.94■□□□□ 0.78
SCARB1-206ENST00000539320 SETD2Q9BYW2 2564 aaPredicted RBP19.94■□□□□ 0.78
SCARB1-206ENST00000539320 NPIPA5A0A0B4J1W7 369 aa19.93■□□□□ 0.78
SCARB1-206ENST00000539320 WDR91A4D1P6 747 aa19.93■□□□□ 0.78
SCARB1-206ENST00000539320 NPIPA7E9PJI5 369 aa19.93■□□□□ 0.78
SCARB1-206ENST00000539320 ITM2AO43736 263 aa19.93■□□□□ 0.78
SCARB1-206ENST00000539320 CGAP01215 116 aa19.93■□□□□ 0.78
SCARB1-206ENST00000539320 NPIPA8P0DM63 369 aa19.93■□□□□ 0.78
SCARB1-206ENST00000539320 ME2P23368 584 aa19.93■□□□□ 0.78
SCARB1-206ENST00000539320 PSMA4P25789 261 aaKnown RBP19.93■□□□□ 0.78
SCARB1-206ENST00000539320 SOAT1P35610 550 aa19.93■□□□□ 0.78
SCARB1-206ENST00000539320 SLC6A8P48029 635 aa19.93■□□□□ 0.78
SCARB1-206ENST00000539320 RAC1P63000 192 aa19.93■□□□□ 0.78
SCARB1-206ENST00000539320 EMX2Q04743 252 aa19.93■□□□□ 0.78
SCARB1-206ENST00000539320 KEAP1Q14145 624 aa19.93■□□□□ 0.78
SCARB1-206ENST00000539320 CHI3L2Q15782 390 aa19.93■□□□□ 0.78
SCARB1-206ENST00000539320 PDCD2Q16342 344 aaPredicted RBP19.93■□□□□ 0.78
SCARB1-206ENST00000539320 CTU2Q2VPK5 515 aaKnown RBP19.93■□□□□ 0.78
SCARB1-206ENST00000539320 FAM214BQ7L5A3 538 aa19.93■□□□□ 0.78
SCARB1-206ENST00000539320 MTERF4Q7Z6M4 381 aaKnown RBP19.93■□□□□ 0.78
SCARB1-206ENST00000539320 TGIF2LYQ8IUE0 185 aa19.93■□□□□ 0.78
SCARB1-206ENST00000539320 ZNF527Q8NB42 609 aa19.93■□□□□ 0.78
SCARB1-206ENST00000539320 OR2V1Q8NHB1 315 aa19.93■□□□□ 0.78
SCARB1-206ENST00000539320 PHOSPHO1Q8TCT1 267 aa19.93■□□□□ 0.78
SCARB1-206ENST00000539320 KLHDC3Q9BQ90 382 aa19.93■□□□□ 0.78
SCARB1-206ENST00000539320 SLC39A3Q9BRY0 314 aa19.93■□□□□ 0.78
SCARB1-206ENST00000539320 TMUB1Q9BVT8 246 aa19.93■□□□□ 0.78
SCARB1-206ENST00000539320 TMEM185BQ9H7F4 350 aa19.93■□□□□ 0.78
SCARB1-206ENST00000539320 ELOVL5Q9NYP7 299 aa19.93■□□□□ 0.78
SCARB1-206ENST00000539320 MCTS1Q9ULC4 181 aaKnown RBP19.93■□□□□ 0.78
SCARB1-206ENST00000539320 ZFHX3Q15911 3703 aa19.92■□□□□ 0.78
SCARB1-206ENST00000539320 UQCRHLA0A096LP55 91 aa19.92■□□□□ 0.78
SCARB1-206ENST00000539320 A0A1W2PPR1 153 aa19.92■□□□□ 0.78
SCARB1-206ENST00000539320 CFLARO15519 480 aa19.92■□□□□ 0.78
SCARB1-206ENST00000539320 SOX30O94993 753 aa19.92■□□□□ 0.78
SCARB1-206ENST00000539320 KCNJ5P48544 419 aa19.92■□□□□ 0.78
SCARB1-206ENST00000539320 ZNF117Q03924 483 aa19.92■□□□□ 0.78
SCARB1-206ENST00000539320 SMU1Q2TAY7 513 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms