RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 GCM2O75603 506 aaPredicted RBP9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 UGT2B17O75795 530 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 LGI1O95970 557 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ADRB1P08588 477 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 LINGO3P0C6S8 592 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 UBL4AP11441 157 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 MASP1P48740 699 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CYB561P49447 251 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ST13P50502 369 aaKnown RBP9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 SRSF6Q13247 344 aaKnown RBP9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 TRIP10Q15642 601 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 MAPK11Q15759 364 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ZNF141Q15928 474 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 EXOSC6Q5RKV6 272 aaKnown RBP9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 MRPL2Q5T653 305 aaKnown RBP9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 SLC22A10Q63ZE4 541 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 B3GNTL1Q67FW5 361 aaPredicted RBP9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 RTL4Q6ZR62 310 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ZAR1Q86SH2 424 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 MARCH3Q86UD3 253 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 PQLC1Q8N2U9 271 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CLIP4Q8N3C7 705 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CADM2Q8N3J6 435 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 AMER2Q8N7J2 671 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 FAM86B1Q8N7N1 296 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ZNF441Q8N8Z8 693 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 OR4C3Q8NH37 302 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ADAMTS17Q8TE56 1095 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 NR4A3Q92570 626 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 TTC9Q92623 222 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 EME1Q96AY2 570 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 DUS3LQ96G46 650 aaKnown RBP9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 SH3YL1Q96HL8 342 aaPredicted RBP9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 JSRP1Q96MG2 331 aaPredicted RBP9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 MCHR1Q99705 422 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.8□□□□□ -0.846e-7■■■□□ 14.9
TNFRSF1A-211ENST00000538363 IL1RAPQ9NPH3 570 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 GPR83Q9NYM4 423 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 PPP4R1LQ9P1A2 415 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 STX18Q9P2W9 335 aaKnown RBP9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 DNAJB9Q9UBS3 223 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 TESMINQ9Y4I5 508 aa9.8□□□□□ -0.84
TNFRSF1A-211ENST00000538363 NCOR2Q9Y618 2525 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 PRAMEF25A6NGN4 478 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CPSF4LA6NMK7 179 aaKnown RBP9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 TNFRSF11BO00300 401 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ADAMDEC1O15204 470 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 EFSO43281 561 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 TLX3O43711 291 aaPredicted RBP9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 OR6B1O95007 311 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 DIRAS1O95057 198 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ANGPTL1O95841 491 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 FBXO45P0C2W1 286 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ZNF23P17027 643 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 RHCEP18577 417 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 RRM2P31350 389 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 EVI2BP34910 448 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ARG2P78540 354 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 C17orf67Q0P5P2 114 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 Q0VFX4 171 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 FGFBP1Q14512 234 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 TOMM20Q15388 145 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 MAPK14Q16539 360 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 FGD3Q5JSP0 725 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 OR2T5Q6IEZ7 315 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ISLR2Q6UXK2 745 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 MISPQ8IVT2 679 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 GPALPP1Q8IXQ4 340 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CYP4Z2PQ8N1L4 340 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 BEST3Q8N1M1 668 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 PIK3C3Q8NEB9 887 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CATSPER1Q8NEC5 780 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 TOR1AIP2Q8NFQ8 470 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 OR2T29Q8NH02 315 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 PHF10Q8WUB8 498 aaKnown RBP9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 OIT3Q8WWZ8 545 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 DTNBP1Q96EV8 351 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CENPNQ96H22 339 aaPredicted RBP9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 PIP5K1AQ99755 562 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 PKP2Q99959 881 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ZNF559Q9BR84 538 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 TIMMDC1Q9NPL8 285 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CTPS2Q9NRF8 586 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 RLIMQ9NVW2 624 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ANKRD10Q9NXR5 420 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ABCG2Q9UNQ0 655 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CARD8Q9Y2G2 431 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ENPP4Q9Y6X5 453 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 DSPPQ9NZW4 1301 aa9.79□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CDHR4A6H8M9 788 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 SAC3D1A6NKF1 404 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CLDN24A6NM45 220 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 FRS3O43559 492 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 EIF4E2O60573 245 aaKnown RBP9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 GADD45GO95257 159 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 NADKO95544 446 aaPredicted RBP9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 F10P00742 488 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 GKN3PP0CG01 181 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 PGCP20142 388 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 SLC6A8P48029 635 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms