RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 CNPY3Q9BT09 278 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 ABHD6Q9BV23 337 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 NUP85Q9BW27 656 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 TRIM7Q9C029 511 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 SLC7A5P2Q9GIP4 190 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 LIME1Q9H400 295 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 FAM60AQ9NP50 221 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 SAMSN1Q9NSI8 373 aaKnown RBP4.72□□□□□ -1.65
CLIP1-207ENST00000536634 IMP3Q9NV31 184 aaKnown RBP4.72□□□□□ -1.65
CLIP1-207ENST00000536634 PKD2L2Q9NZM6 624 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 DHCR7Q9UBM7 475 aaKnown RBP4.72□□□□□ -1.65
CLIP1-207ENST00000536634 SLC24A2Q9UI40 661 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 GSAPA4D1B5 854 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 RGSL1A5PLK6 1076 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 SLCO2B1O94956 709 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 HLA-DQB2P05538 268 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 H1F0P07305 194 aaKnown RBP4.71□□□□□ -1.66
CLIP1-207ENST00000536634 TCF4P15884 667 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 HLA-DPA1P20036 260 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 MMP11P24347 488 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 PBLDP30039 288 aaPredicted RBP4.71□□□□□ -1.66
CLIP1-207ENST00000536634 MIPP30301 263 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 PPP1R2P41236 205 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 MTIF2P46199 727 aaKnown RBP4.71□□□□□ -1.66
CLIP1-207ENST00000536634 NSFP46459 744 aaKnown RBP4.71□□□□□ -1.66
CLIP1-207ENST00000536634 KLK7P49862 253 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 SMSP52788 366 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 CDH6P55285 790 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 DCDC1P59894 354 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 ERVK11-1P61568 191 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 ARG2P78540 354 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 DCDP81605 110 aaKnown RBP4.71□□□□□ -1.66
CLIP1-207ENST00000536634 DMPKQ09013 629 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 PNRC1Q12796 327 aaPredicted RBP4.71□□□□□ -1.66
CLIP1-207ENST00000536634 PLA2G7Q13093 441 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 XRCC4Q13426 336 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 FCN2Q15485 313 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 ZIC1Q15915 447 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 INAQ16352 499 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 KIAA1644Q3SXP7 199 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 NKAIN1Q4KMZ8 207 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 ANKRD20A8PQ5CZ79 823 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 ERMARDQ5T6L9 678 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 RHBDD2Q6NTF9 364 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 ISLR2Q6UXK2 745 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 SHISA6Q6ZSJ9 500 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 COX15Q7KZN9 410 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 AMZ2Q86W34 360 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 ZNF677Q86XU0 584 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 PHF13Q86YI8 300 aaPredicted RBP4.71□□□□□ -1.66
CLIP1-207ENST00000536634 NDUFAF2Q8N183 169 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 BBS5Q8N3I7 341 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 TRAM1L1Q8N609 369 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 RASGEF1AQ8N9B8 481 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 ADAD2Q8NCV1 583 aaKnown RBP4.71□□□□□ -1.66
CLIP1-207ENST00000536634 CHDHQ8NE62 594 aaPredicted RBP4.71□□□□□ -1.66
CLIP1-207ENST00000536634 OR11G2Q8NGC1 345 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 OR4E2Q8NGC2 313 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 PSMF1Q92530 271 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 ARSGQ96EG1 525 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 SAT2Q96F10 170 aaPredicted RBP4.71□□□□□ -1.66
CLIP1-207ENST00000536634 C12orf66Q96MD2 445 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 C17orf62Q9BQA9 187 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 ZSCAN5AQ9BUG6 496 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 PITPNM3Q9BZ71 974 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 POLR1EQ9GZS1 481 aaKnown RBP4.71□□□□□ -1.66
CLIP1-207ENST00000536634 WWP1Q9H0M0 922 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 KIR3DX1Q9H7L2 352 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 SYTL2Q9HCH5 934 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 HHATLQ9HCP6 504 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 NFKBIL1Q9UBC1 381 aaPredicted RBP4.71□□□□□ -1.66
CLIP1-207ENST00000536634 RHCGQ9UBD6 479 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 DNPEPQ9ULA0 475 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 PLAGL1Q9UM63 463 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 MEMO1Q9Y316 297 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 TTLL3Q9Y4R7 772 aa4.71□□□□□ -1.66
CLIP1-207ENST00000536634 SPIN1Q9Y657 262 aaPredicted RBP4.71□□□□□ -1.66
CLIP1-207ENST00000536634 MEGF8Q7Z7M0 2845 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 TRAV17A0A0B4J275 112 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 OR2AG2A6NM03 316 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 BTN3A3O00478 584 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 EPHB6O15197 1021 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 MFSD11O43934 449 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 POP7O75817 140 aaKnown RBP4.7□□□□□ -1.66
CLIP1-207ENST00000536634 OR2B3O76000 313 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 FGFR1OPO95684 399 aaKnown RBP4.7□□□□□ -1.66
CLIP1-207ENST00000536634 CALB1P05937 261 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 HBQ1P09105 142 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 PSMA2P25787 234 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 PRDX3P30048 256 aaKnown RBP4.7□□□□□ -1.66
CLIP1-207ENST00000536634 GABRA4P48169 554 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 RPL26P61254 145 aaKnown RBP4.7□□□□□ -1.66
CLIP1-207ENST00000536634 TFF3Q07654 80 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 MELKQ14680 651 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 HSP90AA4PQ58FG1 418 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 PDPK2PQ6A1A2 396 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 DCUN1D2Q6PH85 259 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 TMCO3Q6UWJ1 677 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 C3P1Q6ZMU1 363 aa4.7□□□□□ -1.66
CLIP1-207ENST00000536634 Q6ZPB1 254 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms