RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 CD53P19397 219 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 FPR1P21462 350 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 CRYGSP22914 178 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 ALDH3A1P30838 453 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 EIF1P41567 113 aaKnown RBP11.79□□□□□ -0.52
RTN3-207ENST00000536011 RAC1P63000 192 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 POU6F2P78424 691 aaPredicted RBP11.79□□□□□ -0.52
RTN3-207ENST00000536011 DUSP5Q16690 384 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 LSM12Q3MHD2 195 aaKnown RBP11.79□□□□□ -0.52
RTN3-207ENST00000536011 ARL13AQ5H913 290 aaPredicted RBP11.79□□□□□ -0.52
RTN3-207ENST00000536011 CPTPQ5TA50 214 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 SHEQ5VZ18 495 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 GTF2IRD2BQ6EKJ0 949 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 FIGNL1Q6PIW4 674 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 ZNF474Q6S9Z5 364 aaPredicted RBP11.79□□□□□ -0.52
RTN3-207ENST00000536011 APOOLQ6UXV4 268 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 ESPNLQ6ZVH7 1005 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 MTERF4Q7Z6M4 381 aaKnown RBP11.79□□□□□ -0.52
RTN3-207ENST00000536011 GTF2IRD2Q86UP8 949 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 GGNQ86UU5 652 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 TRABD2AQ86V40 505 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 LRRN4CLQ8ND94 238 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 OR56A1Q8NGH5 318 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 OR4C3Q8NH37 302 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 FAM110BQ8TC76 370 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 MOAP1Q96BY2 351 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 GIMAP5Q96F15 307 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 WFIKKN1Q96NZ8 548 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 PIP5K1AQ99755 562 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 HOXD1Q9GZZ0 328 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 L2HGDHQ9H9P8 463 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 GIN1Q9NXP7 522 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 LGALS13Q9UHV8 139 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 ATP6V1HQ9UI12 483 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 FAF1Q9UNN5 650 aaPredicted RBP11.79□□□□□ -0.52
RTN3-207ENST00000536011 SNX8Q9Y5X2 465 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 GJE1A6NN92 205 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 TMEM233B4DJY2 109 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 CGAP01215 116 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 HMGN2P05204 90 aaKnown RBP11.78□□□□□ -0.52
RTN3-207ENST00000536011 PABPC4LP0CB38 370 aaKnown RBP11.78□□□□□ -0.52
RTN3-207ENST00000536011 PRPS1L1P21108 318 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 ELK4P28324 431 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 MAD2L1Q13257 205 aaPredicted RBP11.78□□□□□ -0.52
RTN3-207ENST00000536011 GUSBP1Q15486 140 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 PLPPR5Q32ZL2 321 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 SPDYE7PQ495Y7 208 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 XKR7Q5GH72 579 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 BHLHB9Q6PI77 547 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 C20orf204Q6ZNR8 217 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 GALNT10Q86SR1 603 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 BIVMQ86UB2 503 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 ZNF610Q8N9Z0 462 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 GATSQ8NAP1 163 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 FNDC5Q8NAU1 212 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 OR10D3Q8NH80 312 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 OR2V1Q8NHB1 315 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 B4GALNT2Q8NHY0 566 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 AGR3Q8TD06 166 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 OR5P2Q8WZ92 322 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 FAM120BQ96EK7 910 aaKnown RBP11.78□□□□□ -0.52
RTN3-207ENST00000536011 PIK3IP1Q96FE7 263 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 SH3YL1Q96HL8 342 aaPredicted RBP11.78□□□□□ -0.52
RTN3-207ENST00000536011 REXO5Q96IC2 774 aaKnown RBP11.78□□□□□ -0.52
RTN3-207ENST00000536011 RNF145Q96MT1 663 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 ROPN1BQ9BZX4 212 aaPredicted RBP11.78□□□□□ -0.52
RTN3-207ENST00000536011 PIGUQ9H490 435 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 ROPN1Q9HAT0 212 aaPredicted RBP11.78□□□□□ -0.52
RTN3-207ENST00000536011 TIGARQ9NQ88 270 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 DLL4Q9NR61 685 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 MED17Q9NVC6 651 aa11.78□□□□□ -0.52
RTN3-207ENST00000536011 C6orf203Q9P0P8 240 aaPredicted RBP11.78□□□□□ -0.52
RTN3-207ENST00000536011 FAM171A2A8MVW0 826 aa11.77□□□□□ -0.53
RTN3-207ENST00000536011 DEFB108AA8MXU0 73 aa11.77□□□□□ -0.53
RTN3-207ENST00000536011 SHISA8B8ZZ34 492 aa11.77□□□□□ -0.53
RTN3-207ENST00000536011 ADAMDEC1O15204 470 aa11.77□□□□□ -0.53
RTN3-207ENST00000536011 SMPD2O60906 423 aa11.77□□□□□ -0.53
RTN3-207ENST00000536011 SS18L1O75177 396 aaPredicted RBP11.77□□□□□ -0.53
RTN3-207ENST00000536011 PEX11AO75192 247 aa11.77□□□□□ -0.53
RTN3-207ENST00000536011 AQP8O94778 261 aa11.77□□□□□ -0.53
RTN3-207ENST00000536011 NUDT14O95848 222 aa11.77□□□□□ -0.53
RTN3-207ENST00000536011 HOXC12P31275 282 aa11.77□□□□□ -0.53
RTN3-207ENST00000536011 CCKARP32238 428 aa11.77□□□□□ -0.53
RTN3-207ENST00000536011 CCT3P49368 545 aaKnown RBP11.77□□□□□ -0.53
RTN3-207ENST00000536011 SUMO3P55854 103 aaPredicted RBP11.77□□□□□ -0.53
RTN3-207ENST00000536011 NKX6-1P78426 367 aaPredicted RBP11.77□□□□□ -0.53
RTN3-207ENST00000536011 LSM11P83369 360 aaKnown RBP eCLIP11.77□□□□□ -0.53
RTN3-207ENST00000536011 TP53BP2Q13625 1128 aa11.77□□□□□ -0.53
RTN3-207ENST00000536011 LASP1Q14847 261 aaKnown RBP11.77□□□□□ -0.53
RTN3-207ENST00000536011 EXOC3L2Q2M3D2 409 aa11.77□□□□□ -0.53
RTN3-207ENST00000536011 UGT3A2Q3SY77 523 aa11.77□□□□□ -0.53
RTN3-207ENST00000536011 HBMQ6B0K9 141 aa11.77□□□□□ -0.53
RTN3-207ENST00000536011 CDC73Q6P1J9 531 aa11.77□□□□□ -0.53
RTN3-207ENST00000536011 P3H2Q8IVL5 708 aa11.77□□□□□ -0.53
RTN3-207ENST00000536011 LRRC75A-AS1Q8N1F1 130 aa11.77□□□□□ -0.53
RTN3-207ENST00000536011 PSMA8Q8TAA3 256 aa11.77□□□□□ -0.53
RTN3-207ENST00000536011 SFXN5Q8TD22 340 aa11.77□□□□□ -0.53
RTN3-207ENST00000536011 ADAMTS15Q8TE58 950 aa11.77□□□□□ -0.53
RTN3-207ENST00000536011 ARL8AQ96BM9 186 aa11.77□□□□□ -0.53
RTN3-207ENST00000536011 C16orf58Q96GQ5 468 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms