RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 PLAURQ03405 335 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 RAB40BQ12829 278 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.41□□□□□ -0.42
VPS33B-202ENST00000535906 RANBP3LQ86VV4 465 aaPredicted RBP12.41□□□□□ -0.42
VPS33B-202ENST00000535906 VWA5B2Q8N398 1253 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 ARL14Q8N4G2 192 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 OR52R1Q8NGF1 315 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 CHAC2Q8WUX2 184 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 ABHD8Q96I13 439 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 WDFY2Q96P53 400 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 SLC38A2Q96QD8 506 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 NLGN3Q9NZ94 848 aa12.41□□□□□ -0.42
VPS33B-202ENST00000535906 IQCMA0A1B0GVH7 501 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 SLC35F4A4IF30 521 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 SNTNA6NMZ2 147 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 TGFBR3LH3BV60 316 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 BRINP1O60477 761 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 CDC123O75794 336 aaPredicted RBP12.4□□□□□ -0.42
VPS33B-202ENST00000535906 CSF2P04141 144 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 MYL12AP19105 171 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 S1PR1P21453 382 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 NUDT1P36639 197 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 POU6F2P78424 691 aaPredicted RBP12.4□□□□□ -0.42
VPS33B-202ENST00000535906 RUNX1T1Q06455 604 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 SMAD4Q13485 552 aaKnown RBP12.4□□□□□ -0.42
VPS33B-202ENST00000535906 TDGQ13569 410 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 OR1Q1Q15612 314 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 PRTGQ2VWP7 1150 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 FLYWCH1Q4VC44 716 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 ZNF620Q6ZNG0 422 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 ASB15Q8WXK1 588 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 OSTF1Q92882 214 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 RNFT2Q96EX2 444 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 FGF20Q9NP95 211 aaPredicted RBP12.4□□□□□ -0.42
VPS33B-202ENST00000535906 C14orf119Q9NWQ9 140 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 TXNL4BQ9NX01 149 aaKnown RBP12.4□□□□□ -0.42
VPS33B-202ENST00000535906 HCN3Q9P1Z3 774 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 V9GYH0 126 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 TMEM131Q92545 1883 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 TMEM129A0AVI4 362 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 TRAPPC13A5PLN9 417 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 OR2W5A6NFC9 320 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 SURF4O15260 269 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 FOXS1O43638 330 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 OR10H2O60403 315 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 ZNF217O75362 1048 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 IL1AP01583 271 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 FUT1P19526 365 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 POU3F3P20264 500 aaPredicted RBP12.4□□□□□ -0.42
VPS33B-202ENST00000535906 MTNR1AP48039 350 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 RFX3P48380 749 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 WNT4P56705 351 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 PSPHP78330 225 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 PSG6Q00889 435 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 SHFQ7M4L6 423 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 TOR1AIP2Q8NFQ8 470 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 SETD6Q8TBK2 473 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 SLC25A46Q96AG3 418 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 EFHD2Q96C19 240 aaPredicted RBP12.4□□□□□ -0.42
VPS33B-202ENST00000535906 NELL2Q99435 816 aa12.4□□□□□ -0.42
VPS33B-202ENST00000535906 THADAQ6YHU6 1953 aa12.4□□□□□ -0.43
VPS33B-202ENST00000535906 KDM4EB2RXH2 506 aaPredicted RBP12.39□□□□□ -0.43
VPS33B-202ENST00000535906 HRKO00198 91 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 STK25O00506 426 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 NKX2-2O95096 273 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 SLC2A10O95528 541 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 FASLGP48023 281 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 COPZ1P61923 177 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 MAT1AQ00266 395 aaKnown RBP12.39□□□□□ -0.43
VPS33B-202ENST00000535906 ZNF155Q12901 538 aaPredicted RBP12.39□□□□□ -0.43
VPS33B-202ENST00000535906 FZD5Q13467 585 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 ERV3-1Q14264 604 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 CARTPTQ16568 116 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 OR2G6Q5TZ20 316 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 TMPRSS11AQ6ZMR5 421 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 LAX1Q8IWV1 398 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 OR4N2Q8NGD1 307 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 PFN4Q8NHR9 129 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 TMCO6Q96DC7 493 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 PEX11GQ96HA9 241 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 PHOX2BQ99453 314 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 C20orf141Q9NUB4 165 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 CCDC85CA6NKD9 419 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 PLD2O14939 933 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 CDRT1O95170 752 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 LYPD3O95274 346 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 IFI6P09912 130 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 NME1P15531 152 aaKnown RBP12.39□□□□□ -0.43
VPS33B-202ENST00000535906 CD38P28907 300 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 CAPZBP47756 277 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 ELOCQ15369 112 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 KCNJ8Q15842 424 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 PLK5Q496M5 336 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 MINDY4Q4G0A6 757 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 LAPTM4BQ86VI4 370 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 OR8H2Q8N162 312 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 IL17RDQ8NFM7 739 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 LMX1AQ8TE12 382 aa12.39□□□□□ -0.43
VPS33B-202ENST00000535906 HOXB13Q92826 284 aaPredicted RBP12.39□□□□□ -0.43
VPS33B-202ENST00000535906 SAMD8Q96LT4 415 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms