RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 SAMD8Q96LT4 415 aa16.9■□□□□ 0.3
HTATSF1-204ENST00000535601 ELF4Q99607 663 aaPredicted RBP16.9■□□□□ 0.3
HTATSF1-204ENST00000535601 GPN2Q9H9Y4 310 aaPredicted RBP16.9■□□□□ 0.3
HTATSF1-204ENST00000535601 LRRN3E7EW58 273 aa16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 NKX2-2O95096 273 aa16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 DBIP07108 87 aaKnown RBP16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 GPR3P46089 330 aa16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 EXOSC6Q5RKV6 272 aaKnown RBP16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 ACOT11Q8WXI4 607 aaPredicted RBP16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 GAL3ST4Q96RP7 486 aa16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 CHCHD6Q9BRQ6 235 aa16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 DUSP15Q9H1R2 295 aaPredicted RBP16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 LRRN3Q9H3W5 708 aa16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 MED20Q9H944 212 aa16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 TIMMDC1Q9NPL8 285 aa16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 TBC1D23Q9NUY8 699 aa16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 CORINQ9Y5Q5 1042 aa16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 CACNA1CQ13936 2221 aa16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 GABARAPO95166 117 aa16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 CFIP05156 583 aa16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 HSD11B2P80365 405 aa16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 TSTQ16762 297 aaKnown RBP16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 GXYLT1Q4G148 440 aa16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 PERM1Q5SV97 790 aa16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 LYSMD4Q5XG99 296 aa16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 SLCO6A1Q86UG4 719 aa16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 OR6C4Q8NGE1 309 aa16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 NACC2Q96BF6 587 aa16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 STACQ99469 402 aa16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 SMOC1Q9H4F8 434 aa16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 CHCHD3Q9NX63 227 aaKnown RBP16.89■□□□□ 0.29
HTATSF1-204ENST00000535601 TRAV27A0A087WT01 109 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 IGHV3-20A0A0C4DH32 117 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 DUX1O43812 170 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 DBTP11182 482 aaKnown RBP16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 CD79BP40259 229 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 MAGEA8P43361 318 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 GRM7Q14831 915 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 FAM69BQ5VUD6 431 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 UBE2UQ5VVX9 321 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 ZNF595Q8IYB9 648 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 SLC25A19Q9HC21 320 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 ENOPH1Q9UHY7 261 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 PMF1-BGLAPU3KQ54 211 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 SLITRK5O94991 958 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 HNRNPCP07910 306 aaKnown RBP eCLIP16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 IFI30P13284 250 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 RPS4Y1P22090 263 aaKnown RBP16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 ZNHIT3Q15649 155 aaPredicted RBP16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 RANBP3LQ86VV4 465 aaPredicted RBP16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 OR51A7Q8NH64 312 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 GNPDA2Q8TDQ7 276 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 ZNF582Q96NG8 517 aaPredicted RBP16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 ZNF285Q96NJ3 590 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 TRIM45Q9H8W5 580 aaPredicted RBP16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 LANCL2Q9NS86 450 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 CTSFQ9UBX1 484 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 H3BMH7 237 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 M0R3G1 203 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 NUDT21O43809 227 aaKnown RBP16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 CDK5Q00535 292 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 TSPAN31Q12999 210 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 TBCEQ15813 527 aaPredicted RBP16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 PLAG1Q6DJT9 500 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 SLC27A4Q6P1M0 643 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 ZNF574Q6ZN55 896 aaPredicted RBP16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 OR8J1Q8NGP2 316 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 OR13C2Q8NGS9 318 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 ITFG2Q969R8 447 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 LGALS12Q96DT0 336 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 SENP5Q96HI0 755 aaPredicted RBP16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 CENPOQ9BU64 300 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 UCK1Q9HA47 277 aa16.88■□□□□ 0.29
HTATSF1-204ENST00000535601 TRIM64BA6NI03 449 aa16.87■□□□□ 0.29
HTATSF1-204ENST00000535601 NGFRP08138 427 aa16.87■□□□□ 0.29
HTATSF1-204ENST00000535601 GLB1P16278 677 aa16.87■□□□□ 0.29
HTATSF1-204ENST00000535601 BMXP51813 675 aa16.87■□□□□ 0.29
HTATSF1-204ENST00000535601 EMP3P54852 163 aa16.87■□□□□ 0.29
HTATSF1-204ENST00000535601 GHDCQ8N2G8 530 aa16.87■□□□□ 0.29
HTATSF1-204ENST00000535601 PTPMT1Q8WUK0 201 aaPredicted RBP16.87■□□□□ 0.29
HTATSF1-204ENST00000535601 DPYSL5Q9BPU6 564 aa16.87■□□□□ 0.29
HTATSF1-204ENST00000535601 SATB2Q9UPW6 733 aa16.87■□□□□ 0.29
HTATSF1-204ENST00000535601 EFCAB9A8MZ26 197 aa16.87■□□□□ 0.29
HTATSF1-204ENST00000535601 AIREO43918 545 aa16.87■□□□□ 0.29
HTATSF1-204ENST00000535601 NADKO95544 446 aaPredicted RBP16.87■□□□□ 0.29
HTATSF1-204ENST00000535601 CLPSP04118 112 aa16.87■□□□□ 0.29
HTATSF1-204ENST00000535601 CLK1P49759 484 aaKnown RBP16.87■□□□□ 0.29
HTATSF1-204ENST00000535601 FXYD6P3P58550 94 aa16.87■□□□□ 0.29
HTATSF1-204ENST00000535601 LANCL3Q6ZV70 420 aa16.87■□□□□ 0.29
HTATSF1-204ENST00000535601 MBOAT2Q6ZWT7 520 aa16.87■□□□□ 0.29
HTATSF1-204ENST00000535601 SLC15A4Q8N697 577 aa16.87■□□□□ 0.29
HTATSF1-204ENST00000535601 BCORP1Q8N888 145 aa16.87■□□□□ 0.29
HTATSF1-204ENST00000535601 POGLUT1Q8NBL1 392 aa16.87■□□□□ 0.29
HTATSF1-204ENST00000535601 PCED1AQ9H1Q7 454 aa16.87■□□□□ 0.29
HTATSF1-204ENST00000535601 FGF21Q9NSA1 209 aa16.87■□□□□ 0.29
HTATSF1-204ENST00000535601 WDR70Q9NW82 654 aa16.87■□□□□ 0.29
HTATSF1-204ENST00000535601 A0A1W2PPC1 479 aa16.86■□□□□ 0.29
HTATSF1-204ENST00000535601 TRAPPC13A5PLN9 417 aa16.86■□□□□ 0.29
HTATSF1-204ENST00000535601 COQ9O75208 318 aa16.86■□□□□ 0.29
HTATSF1-204ENST00000535601 OR5F1O95221 314 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms