RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 GIFP27352 417 aa8.46□□□□□ -1.05
SF3B2-216ENST00000534765 FEN1P39748 380 aaKnown RBP8.46□□□□□ -1.05
SF3B2-216ENST00000534765 GSTM5P46439 218 aa8.46□□□□□ -1.05
SF3B2-216ENST00000534765 ADPRHP54922 357 aa8.46□□□□□ -1.05
SF3B2-216ENST00000534765 BLOC1S1P78537 153 aa8.46□□□□□ -1.05
SF3B2-216ENST00000534765 LGALSLQ3ZCW2 172 aaPredicted RBP8.46□□□□□ -1.05
SF3B2-216ENST00000534765 SLC25A25Q6KCM7 469 aa8.46□□□□□ -1.05
SF3B2-216ENST00000534765 TSPYL5Q86VY4 417 aaPredicted RBP8.46□□□□□ -1.05
SF3B2-216ENST00000534765 B3GNT7Q8NFL0 401 aa8.46□□□□□ -1.05
SF3B2-216ENST00000534765 RPLP0P6Q8NHW5 317 aa8.46□□□□□ -1.05
SF3B2-216ENST00000534765 MRPL48Q96GC5 212 aaKnown RBP8.46□□□□□ -1.05
SF3B2-216ENST00000534765 PEX11GQ96HA9 241 aa8.46□□□□□ -1.05
SF3B2-216ENST00000534765 MACROD1Q9BQ69 325 aa8.46□□□□□ -1.05
SF3B2-216ENST00000534765 FUZQ9BT04 418 aa8.46□□□□□ -1.05
SF3B2-216ENST00000534765 TMEM121BQ9BXQ6 578 aaPredicted RBP8.46□□□□□ -1.05
SF3B2-216ENST00000534765 BRINP2Q9C0B6 783 aa8.46□□□□□ -1.05
SF3B2-216ENST00000534765 CHRDQ9H2X0 955 aa8.46□□□□□ -1.05
SF3B2-216ENST00000534765 GPRC5BQ9NZH0 403 aa8.46□□□□□ -1.05
SF3B2-216ENST00000534765 ABCA7Q8IZY2 2146 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 SCN3AQ9NY46 2000 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 IGKV1-8A0A0C4DH67 115 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 OR52A4PA6NMU1 304 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 GPR31O00270 319 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 SDC3O75056 442 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 PCDH8O95206 1070 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 SOX14O95416 240 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 LALBAP00709 142 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 NPPBP16860 134 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 NDUFV2P19404 249 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 SRP9P49458 86 aaKnown RBP8.46□□□□□ -1.06
SF3B2-216ENST00000534765 EMX2Q04743 252 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 PLA2G7Q13093 441 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 NAE1Q13564 534 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 RCAN2Q14206 197 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 PUM1Q14671 1186 aaKnown RBP eCLIP8.46□□□□□ -1.062e-16■■■□□ 17
SF3B2-216ENST00000534765 EIF4HQ15056 248 aaKnown RBP8.46□□□□□ -1.06
SF3B2-216ENST00000534765 AGERQ15109 404 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 TBCEQ15813 527 aaPredicted RBP8.46□□□□□ -1.06
SF3B2-216ENST00000534765 AVPI1Q5T686 147 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 RAB12Q6IQ22 244 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 SLC30A6Q6NXT4 461 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 TRMT11Q7Z4G4 463 aaKnown RBP8.46□□□□□ -1.06
SF3B2-216ENST00000534765 DCUN1D3Q8IWE4 304 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 PYURFQ96I23 114 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 KCTD7Q96MP8 289 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 DPH7Q9BTV6 452 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 TMED9Q9BVK6 235 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 CACNG6Q9BXT2 260 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 CD207Q9UJ71 328 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 CBY1Q9Y3M2 126 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 PIAS3Q9Y6X2 628 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 RHPN2P1A8MT19 583 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 C4orf51C9J302 202 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 TNFRSF11BO00300 401 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 SLC16A6O15403 523 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 CHP2O43745 196 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 SCELO95171 688 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 SERPINA3P01011 423 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 TFP02787 698 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 CELA2BP08218 269 aaPredicted RBP8.46□□□□□ -1.06
SF3B2-216ENST00000534765 XPAP23025 273 aaPredicted RBP8.46□□□□□ -1.06
SF3B2-216ENST00000534765 DNAJA1P31689 397 aaKnown RBP8.46□□□□□ -1.06
SF3B2-216ENST00000534765 DPTQ07507 201 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 FOXM1Q08050 763 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 DOC2AQ14183 400 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 TCTE1Q5JU00 501 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 KRBOX4Q5JUW0 171 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 TMIGD1Q6UXZ0 262 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 OR5T2Q8NGG2 359 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 PHOSPHO1Q8TCT1 267 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 MARVELD3Q96A59 401 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 FAM131CQ96AQ9 280 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 LRIG1Q96JA1 1093 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 MRGPRX1Q96LB2 322 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 TSSK3Q96PN8 268 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 INPP5KQ9BT40 448 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 REEP4Q9H6H4 257 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 EVA1AQ9H8M9 152 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 GHRLQ9UBU3 117 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 PHF11Q9UIL8 331 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 GPR160Q9UJ42 338 aa8.46□□□□□ -1.06
SF3B2-216ENST00000534765 ANXA2P2A6NMY6 339 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 CCNB2O95067 398 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 FPR1P21462 350 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 RNF4P78317 190 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 MLLT1Q03111 559 aaPredicted RBP8.45□□□□□ -1.06
SF3B2-216ENST00000534765 FZD5Q13467 585 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 GK2Q14410 553 aaPredicted RBP8.45□□□□□ -1.06
SF3B2-216ENST00000534765 SMAD2Q15796 467 aaKnown RBP8.45□□□□□ -1.06
SF3B2-216ENST00000534765 SPANXN4Q5MJ08 99 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 ETFRF1Q6IPR1 90 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 AGTRAPQ6RW13 159 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 NAA40Q86UY6 237 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 LAPTM4BQ86VI4 370 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 ZNF687Q8N1G0 1237 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 AMER3Q8N944 861 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 SLC13A3Q8WWT9 602 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 GAL3ST3Q96A11 431 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 C3orf49Q96BT1 292 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 GABRG3Q99928 467 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms