RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 IFNEQ86WN2 208 aa18.02■□□□□ 0.48
CHEK1-215ENST00000533778 CHERPQ8IWX8 916 aaKnown RBP18.02■□□□□ 0.48
CHEK1-215ENST00000533778 SLC38A5Q8WUX1 472 aa18.02■□□□□ 0.48
CHEK1-215ENST00000533778 CMTM5Q96DZ9 223 aa18.02■□□□□ 0.48
CHEK1-215ENST00000533778 C1GALT1C1Q96EU7 318 aa18.02■□□□□ 0.48
CHEK1-215ENST00000533778 CCT8L2Q96SF2 557 aa18.02■□□□□ 0.48
CHEK1-215ENST00000533778 CPPED1Q9BRF8 314 aaPredicted RBP18.02■□□□□ 0.48
CHEK1-215ENST00000533778 CCDC106Q9BWC9 280 aa18.02■□□□□ 0.48
CHEK1-215ENST00000533778 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.02■□□□□ 0.48
CHEK1-215ENST00000533778 SLC35A3Q9Y2D2 325 aa18.02■□□□□ 0.48
CHEK1-215ENST00000533778 SHANK1Q9Y566 2161 aa18.01■□□□□ 0.47
CHEK1-215ENST00000533778 A0A087WZY1 265 aa18.01■□□□□ 0.47
CHEK1-215ENST00000533778 A0A0G2JPF8 293 aa18.01■□□□□ 0.47
CHEK1-215ENST00000533778 HNRNPCL2B2RXH8 293 aa18.01■□□□□ 0.47
CHEK1-215ENST00000533778 HNRNPCL3B7ZW38 293 aa18.01■□□□□ 0.47
CHEK1-215ENST00000533778 C5orf58C9J3I9 102 aa18.01■□□□□ 0.47
CHEK1-215ENST00000533778 NPIPA2E9PIF3 369 aa18.01■□□□□ 0.47
CHEK1-215ENST00000533778 NPIPA3F8WFD2 350 aa18.01■□□□□ 0.47
CHEK1-215ENST00000533778 ZNF264O43296 627 aa18.01■□□□□ 0.47
CHEK1-215ENST00000533778 HNRNPCL1O60812 293 aaKnown RBP18.01■□□□□ 0.47
CHEK1-215ENST00000533778 TNFRSF21O75509 655 aa18.01■□□□□ 0.47
CHEK1-215ENST00000533778 ZIC2O95409 532 aaPredicted RBP18.01■□□□□ 0.47
CHEK1-215ENST00000533778 ACTL6AO96019 429 aa18.01■□□□□ 0.47
CHEK1-215ENST00000533778 BCHEP06276 602 aa18.01■□□□□ 0.47
CHEK1-215ENST00000533778 TPOP07202 933 aa18.01■□□□□ 0.47
CHEK1-215ENST00000533778 HNRNPCL4P0DMR1 293 aa18.01■□□□□ 0.47
CHEK1-215ENST00000533778 UBL4AP11441 157 aa18.01■□□□□ 0.47
CHEK1-215ENST00000533778 HK1P19367 917 aa18.01■□□□□ 0.47
CHEK1-215ENST00000533778 CA7P43166 264 aa18.01■□□□□ 0.47
CHEK1-215ENST00000533778 C4orf17Q53FE4 359 aa18.01■□□□□ 0.47
CHEK1-215ENST00000533778 GKAP1Q5VSY0 366 aaPredicted RBP18.01■□□□□ 0.47
CHEK1-215ENST00000533778 PEX5LQ8IYB4 626 aa18.01■□□□□ 0.47
CHEK1-215ENST00000533778 RELTQ969Z4 430 aa18.01■□□□□ 0.47
CHEK1-215ENST00000533778 LRRC58Q96CX6 371 aa18.01■□□□□ 0.47
CHEK1-215ENST00000533778 MYLK2Q9H1R3 596 aa18.01■□□□□ 0.47
CHEK1-215ENST00000533778 SLC38A1Q9H2H9 487 aa18.01■□□□□ 0.47
CHEK1-215ENST00000533778 SLC5A6Q9Y289 635 aa18.01■□□□□ 0.47
CHEK1-215ENST00000533778 HRH3Q9Y5N1 445 aa18.01■□□□□ 0.47
CHEK1-215ENST00000533778 SPENQ96T58 3664 aaKnown RBP18.01■□□□□ 0.47
CHEK1-215ENST00000533778 NUP214P35658 2090 aaPredicted RBP18■□□□□ 0.47
CHEK1-215ENST00000533778 AGAP5A6NIR3 686 aa18■□□□□ 0.47
CHEK1-215ENST00000533778 LINC01387J3KSC0 135 aa18■□□□□ 0.47
CHEK1-215ENST00000533778 ZIC3O60481 467 aa18■□□□□ 0.47
CHEK1-215ENST00000533778 SHOX2O60902 331 aaPredicted RBP18■□□□□ 0.47
CHEK1-215ENST00000533778 DCTN3O75935 186 aa18■□□□□ 0.47
CHEK1-215ENST00000533778 CSTAP01040 98 aa18■□□□□ 0.47
CHEK1-215ENST00000533778 DBIP07108 87 aaKnown RBP18■□□□□ 0.47
CHEK1-215ENST00000533778 COX4I1P13073 169 aa18■□□□□ 0.47
CHEK1-215ENST00000533778 P2RX1P51575 399 aa18■□□□□ 0.47
CHEK1-215ENST00000533778 ZNF41P51814 821 aaPredicted RBP18■□□□□ 0.47
CHEK1-215ENST00000533778 PER3P56645 1201 aa18■□□□□ 0.47
CHEK1-215ENST00000533778 C3AR1Q16581 482 aa18■□□□□ 0.47
CHEK1-215ENST00000533778 MTFR2Q6P444 385 aa18■□□□□ 0.47
CHEK1-215ENST00000533778 ENPP6Q6UWR7 440 aa18■□□□□ 0.47
CHEK1-215ENST00000533778 OLIG3Q7RTU3 272 aa18■□□□□ 0.47
CHEK1-215ENST00000533778 CMIPQ8IY22 773 aa18■□□□□ 0.47
CHEK1-215ENST00000533778 PM20D2Q8IYS1 436 aa18■□□□□ 0.47
CHEK1-215ENST00000533778 TOR1AIP2Q8NFQ8 470 aa18■□□□□ 0.47
CHEK1-215ENST00000533778 ABTB1Q969K4 478 aaPredicted RBP18■□□□□ 0.47
CHEK1-215ENST00000533778 TMEM19Q96HH6 336 aa18■□□□□ 0.47
CHEK1-215ENST00000533778 SH3YL1Q96HL8 342 aaPredicted RBP18■□□□□ 0.47
CHEK1-215ENST00000533778 SFXN2Q96NB2 322 aa18■□□□□ 0.47
CHEK1-215ENST00000533778 TREX2Q9BQ50 279 aaPredicted RBP18■□□□□ 0.47
CHEK1-215ENST00000533778 PIGQQ9BRB3 760 aa18■□□□□ 0.47
CHEK1-215ENST00000533778 TMEM38AQ9H6F2 299 aa18■□□□□ 0.47
CHEK1-215ENST00000533778 SPRR3Q9UBC9 169 aa18■□□□□ 0.47
CHEK1-215ENST00000533778 KCNE5Q9UJ90 142 aa18■□□□□ 0.47
CHEK1-215ENST00000533778 CARD8Q9Y2G2 431 aa18■□□□□ 0.47
CHEK1-215ENST00000533778 EXPH5Q8NEV8 1989 aa18■□□□□ 0.47
CHEK1-215ENST00000533778 PRRC2CQ9Y520 2896 aaKnown RBP17.99■□□□□ 0.47
CHEK1-215ENST00000533778 FIGNL2A6NMB9 653 aa17.99■□□□□ 0.47
CHEK1-215ENST00000533778 C17orf51A8MQB3 221 aa17.99■□□□□ 0.47
CHEK1-215ENST00000533778 NUDT7P0C024 238 aa17.99■□□□□ 0.47
CHEK1-215ENST00000533778 ESRRAP11474 423 aaPredicted RBP17.99■□□□□ 0.47
CHEK1-215ENST00000533778 IL7RP16871 459 aa17.99■□□□□ 0.47
CHEK1-215ENST00000533778 CHMP24386 653 aa17.99■□□□□ 0.47
CHEK1-215ENST00000533778 PRDX6P30041 224 aa17.99■□□□□ 0.47
CHEK1-215ENST00000533778 KCNJ10P78508 379 aa17.99■□□□□ 0.47
CHEK1-215ENST00000533778 ZNF117Q03924 483 aa17.99■□□□□ 0.47
CHEK1-215ENST00000533778 FGFBP1Q14512 234 aa17.99■□□□□ 0.47
CHEK1-215ENST00000533778 SF3B4Q15427 424 aaKnown RBP eCLIP17.99■□□□□ 0.47
CHEK1-215ENST00000533778 MAPK14Q16539 360 aa17.99■□□□□ 0.47
CHEK1-215ENST00000533778 ZSWIM7Q19AV6 140 aa17.99■□□□□ 0.47
CHEK1-215ENST00000533778 GXYLT1Q4G148 440 aa17.99■□□□□ 0.47
CHEK1-215ENST00000533778 C1QL3Q5VWW1 255 aa17.99■□□□□ 0.47
CHEK1-215ENST00000533778 VASNQ6EMK4 673 aa17.99■□□□□ 0.47
CHEK1-215ENST00000533778 CD163Q86VB7 1156 aa17.99■□□□□ 0.47
CHEK1-215ENST00000533778 DOLPP1Q86YN1 238 aa17.99■□□□□ 0.47
CHEK1-215ENST00000533778 FAM26EQ8N5C1 309 aa17.99■□□□□ 0.47
CHEK1-215ENST00000533778 ANKS4BQ8N8V4 417 aa17.99■□□□□ 0.47
CHEK1-215ENST00000533778 OR8J3Q8NGG0 315 aa17.99■□□□□ 0.47
CHEK1-215ENST00000533778 BBS10Q8TAM1 723 aa17.99■□□□□ 0.47
CHEK1-215ENST00000533778 ZBTB8AQ96BR9 441 aa17.99■□□□□ 0.47
CHEK1-215ENST00000533778 LRRC37BQ96QE4 947 aa17.99■□□□□ 0.47
CHEK1-215ENST00000533778 LAT2Q9GZY6 243 aa17.99■□□□□ 0.47
CHEK1-215ENST00000533778 TP63Q9H3D4 680 aaPredicted RBP17.99■□□□□ 0.47
CHEK1-215ENST00000533778 IKZF5Q9H5V7 419 aa17.99■□□□□ 0.47
CHEK1-215ENST00000533778 RUBCNLQ9H714 662 aa17.99■□□□□ 0.47
CHEK1-215ENST00000533778 EFCAB1Q9HAE3 211 aa17.99■□□□□ 0.47
CHEK1-215ENST00000533778 BCL2L10Q9HD36 194 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms