RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 ALG1L2C9J202 215 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 SLCO1B7G3V0H7 640 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 SMAD9O15198 467 aaKnown RBP6.87□□□□□ -1.31
NXF1-215ENST00000533440 GMFGO60234 142 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 PRKD3O94806 890 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 VENTXO95231 258 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 UTS2O95399 124 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 PDYNP01213 254 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 IL3P08700 152 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 DHRS4L1P0CG22 281 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 BMP4P12644 408 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 ZNF23P17027 643 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 ME2P23368 584 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 PTAFRP25105 342 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 SHC1P29353 583 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 OR3A2P47893 321 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 PDLIM4P50479 330 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 PSMD4P55036 377 aaKnown RBP6.87□□□□□ -1.31
NXF1-215ENST00000533440 MANFP55145 182 aaKnown RBP6.87□□□□□ -1.31
NXF1-215ENST00000533440 SPOCK1Q08629 439 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 ACAP2Q15057 778 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 FAM83EQ2M2I3 478 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 PDLIM3Q53GG5 364 aaPredicted RBP6.87□□□□□ -1.31
NXF1-215ENST00000533440 TTC19Q6DKK2 380 aaPredicted RBP6.87□□□□□ -1.31
NXF1-215ENST00000533440 SLC22A25Q6T423 547 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 THSD4Q6ZMP0 1018 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 FCRLAQ7L513 359 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 FAM9CQ8IZT9 166 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 LILRA2Q8N149 483 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 C1orf52Q8N6N3 182 aaKnown RBP6.87□□□□□ -1.31
NXF1-215ENST00000533440 SEMA6DQ8NFY4 1073 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 PYROXD1Q8WU10 500 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 KCTD4Q8WVF5 259 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 SLC9A6Q92581 669 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 ATP6V1E2Q96A05 226 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 EXOSC8Q96B26 276 aaKnown RBP6.87□□□□□ -1.31
NXF1-215ENST00000533440 REXO5Q96IC2 774 aaKnown RBP6.87□□□□□ -1.31
NXF1-215ENST00000533440 GPR78Q96P69 363 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 PIMREGQ9BSJ6 248 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 SOX7Q9BT81 388 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 ELOVL6Q9H5J4 265 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 BCO1Q9HAY6 547 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 HHATLQ9HCP6 504 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 Q9N2J8 555 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 TIGARQ9NQ88 270 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 SLC35C2Q9NQQ7 365 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 FARSBQ9NSD9 589 aaKnown RBP6.87□□□□□ -1.31
NXF1-215ENST00000533440 MED17Q9NVC6 651 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 PRSS50Q9UI38 385 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 MCM8Q9UJA3 840 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 MRTO4Q9UKD2 239 aaKnown RBP6.87□□□□□ -1.31
NXF1-215ENST00000533440 C19orf53Q9UNZ5 99 aaPredicted RBP6.87□□□□□ -1.31
NXF1-215ENST00000533440 PMF1-BGLAPU3KQ54 211 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 ESYT3A0FGR9 886 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 TMEM89A2RUT3 159 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 MYO1GB0I1T2 1018 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 UPK1AO00322 258 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 RGS14O43566 566 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 SLITRK5O94991 958 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 ESRRBO95718 433 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 IGKV1D-16P01601 117 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 C2P06681 752 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 NGFRP08138 427 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 LINGO3P0C6S8 592 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 GGT1P19440 569 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 IGHV1-2P23083 117 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 EDNRAP25101 427 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 CD40P25942 277 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 MPIP34949 423 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 ARL1P40616 181 aaPredicted RBP6.86□□□□□ -1.31
NXF1-215ENST00000533440 CHRNB3Q05901 458 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 SLC18A2Q05940 514 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 GRAMD1BQ3KR37 738 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 SGO1Q5FBB7 561 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 ARL13AQ5H913 290 aaPredicted RBP6.86□□□□□ -1.31
NXF1-215ENST00000533440 DEF8Q6ZN54 512 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 CCDC91Q7Z6B0 441 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 OR2L13Q8N349 312 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 SLC43A2Q8N370 569 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 ZNF433Q8N7K0 673 aaPredicted RBP6.86□□□□□ -1.31
NXF1-215ENST00000533440 CEP112Q8N8E3 955 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 PTGR2Q8N8N7 351 aaPredicted RBP6.86□□□□□ -1.31
NXF1-215ENST00000533440 OR4F6Q8NGB9 312 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 OR2W6PQ8NHA6 318 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 FAM110BQ8TC76 370 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 SELENOMQ8WWX9 145 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 FOXN4Q96NZ1 517 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 NSUN5Q96P11 429 aaKnown RBP6.86□□□□□ -1.31
NXF1-215ENST00000533440 KLHDC3Q9BQ90 382 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 PSD2Q9BQI7 771 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 INPP5KQ9BT40 448 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 LMF2Q9BU23 707 aaKnown RBP6.86□□□□□ -1.31
NXF1-215ENST00000533440 SHCBP1LQ9BZQ2 653 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 BHLHE41Q9C0J9 482 aaPredicted RBP6.86□□□□□ -1.31
NXF1-215ENST00000533440 CXorf36Q9H7Y0 433 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 COQ10BQ9H8M1 238 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 GIMAP4Q9NUV9 329 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 NMRK1Q9NWW6 199 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 SENP1Q9P0U3 644 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 CPSF2Q9P2I0 782 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms