RNA–Protein interactions for RNA: ENST00000532791.5

FGFR1-238, Transcript of fibroblast growth factor receptor 1, human

APPRIS ALT1 TSL 5 BASIC

Gene FGFR1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-238	ENST00000532791	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	18.4	■□□□□ 0.54
FGFR1-238	ENST00000532791	C22orf15	Q8WYQ4	148 aa		18.4	■□□□□ 0.54
FGFR1-238	ENST00000532791	PRRC1	Q96M27	445 aa		18.4	■□□□□ 0.54
FGFR1-238	ENST00000532791	DUSP23	Q9BVJ7	150 aa		18.4	■□□□□ 0.54
FGFR1-238	ENST00000532791	OR6C2	Q9NZP2	312 aa		18.4	■□□□□ 0.54
FGFR1-238	ENST00000532791	DNAJB11	Q9UBS4	358 aa		18.4	■□□□□ 0.54
FGFR1-238	ENST00000532791	AK6	Q9Y3D8	172 aa	Known RBP	18.4	■□□□□ 0.54
FGFR1-238	ENST00000532791	PRSS21	Q9Y6M0	314 aa		18.4	■□□□□ 0.54
FGFR1-238	ENST00000532791	PPP5C	P53041	499 aa		18.39	■□□□□ 0.54
FGFR1-238	ENST00000532791	PTPRR	Q15256	657 aa		18.39	■□□□□ 0.54
FGFR1-238	ENST00000532791	GARNL3	Q5VVW2	1013 aa		18.39	■□□□□ 0.54
FGFR1-238	ENST00000532791	PPIL3	Q9H2H8	161 aa	Known RBP	18.39	■□□□□ 0.54
FGFR1-238	ENST00000532791	ZNF142	P52746	1687 aa	Predicted RBP	18.39	■□□□□ 0.54
FGFR1-238	ENST00000532791	MYH2	Q9UKX2	1941 aa		18.39	■□□□□ 0.54
FGFR1-238	ENST00000532791	LCK	P06239	509 aa		18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	HOXC13	P31276	330 aa		18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	HTR3A	P46098	478 aa		18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	ERVK-25	P63136	954 aa		18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	EEF1A1	P68104	462 aa	Known RBP	18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	AKR1C8P	Q5T2L2	129 aa		18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	PIP5KL1	Q5T9C9	394 aa		18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	C17orf50	Q8WW18	174 aa		18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	MYADM	Q96S97	322 aa		18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	NTMT1	Q9BV86	223 aa		18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	INIP	Q9NRY2	104 aa		18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	APOC3	P02656	99 aa		18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	CDK5R2	Q13319	367 aa		18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	DPY19L4	Q7Z388	723 aa		18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	PDZD9	Q8IXQ8	264 aa		18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	INTS14	Q96SY0	518 aa		18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	OR10A5	Q9H207	317 aa		18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	OR10A2	Q9H208	303 aa		18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	CPNE7	Q9UBL6	633 aa		18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	LSM5	Q9Y4Y9	91 aa	Known RBP	18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	NUDT21	O43809	227 aa	Known RBP	18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	EXOSC7	Q15024	291 aa	Known RBP	18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	RAB41	Q5JT25	222 aa		18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	OR56B2P	Q8NGI1	322 aa		18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	DCAF13	Q9NV06	445 aa	Known RBP	18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	B3GNT2	Q9NY97	397 aa		18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	GABRR3	A8MPY1	467 aa		18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	TRA2B	P62995	288 aa	Known RBP	18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	MS4A2	Q01362	244 aa		18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	ZNF765	Q7L2R6	523 aa		18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	CNOT9	Q92600	299 aa	Known RBP	18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	LMF2	Q9BU23	707 aa	Known RBP	18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	ST6GALNAC5	Q9BVH7	336 aa		18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	SLC6A14	Q9UN76	642 aa		18.39	■□□□□ 0.53
FGFR1-238	ENST00000532791	SC5D	O75845	299 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	UGT2B7	P16662	529 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	PRDX3	P30048	256 aa	Known RBP	18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	CCR7	P32248	378 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	C3orf58	Q8NDZ4	430 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	POC1B	Q8TC44	478 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	BPIFA2	Q96DR5	249 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	VAPA	Q9P0L0	249 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	YARS2	Q9Y2Z4	477 aa	Known RBP	18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	CSNK1D	P48730	415 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	CAV2	P51636	162 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	ADARB1	P78563	741 aa	Known RBP	18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	SLC7A9	P82251	487 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	TBC1D20	Q96BZ9	403 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	ADO	Q96SZ5	270 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	TMEM181	Q9P2C4	612 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	POLH	Q9Y253	713 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	RHBDD3	Q9Y3P4	386 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	KNDC1	Q76NI1	1749 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	NALCN	Q8IZF0	1738 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	LRRC37A3	O60309	1634 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	FAM230A	A0A1W2PPH8	454 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	LYRM1	O43325	122 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	IDUA	P35475	653 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	SLC6A11	P48066	632 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	CTBS	Q01459	385 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	TRMT2B	Q96GJ1	504 aa	Known RBP	18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	TXNDC15	Q96J42	360 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	ARL5B	Q96KC2	179 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	TIMM29	Q9BSF4	260 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	SLC6A16	Q9GZN6	736 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	NXF5	Q9H1B4	397 aa	Known RBP	18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	CBLC	Q9ULV8	474 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	TRBV11-1	A0A0K0K1C0	115 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	CD63	P08962	238 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	GPX3	P22352	226 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	CD6	P30203	668 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	SGPP2	Q8IWX5	399 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	ZNF587	Q96SQ5	575 aa	Predicted RBP	18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	SLC30A3	Q99726	388 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	BCL7B	Q9BQE9	202 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	ANKRD60	Q9BZ19	345 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	SLC6A5	Q9Y345	797 aa		18.38	■□□□□ 0.53
FGFR1-238	ENST00000532791	TMX2-CTNND1	H3BSU7	103 aa		18.37	■□□□□ 0.53
FGFR1-238	ENST00000532791	LUM	P51884	338 aa	Predicted RBP	18.37	■□□□□ 0.53
FGFR1-238	ENST00000532791	KIAA1211L	Q6NV74	962 aa		18.37	■□□□□ 0.53
FGFR1-238	ENST00000532791	LANCL3	Q6ZV70	420 aa		18.37	■□□□□ 0.53
FGFR1-238	ENST00000532791	MEX3D	Q86XN8	651 aa	Known RBP	18.37	■□□□□ 0.53
FGFR1-238	ENST00000532791	OR51B6	Q9H340	312 aa		18.37	■□□□□ 0.53
FGFR1-238	ENST00000532791	TREX1	Q9NSU2	369 aa		18.37	■□□□□ 0.53
FGFR1-238	ENST00000532791	CXXC1	Q9P0U4	656 aa	Predicted RBP	18.37	■□□□□ 0.53
FGFR1-238	ENST00000532791	PTGER1	P34995	402 aa		18.37	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms