RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 POLR3HQ9Y535 204 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 ZNF462Q96JM2 2506 aa5.33□□□□□ -1.56
HMGB1P42-201ENST00000532126 TLN1Q9Y490 2541 aaKnown RBP5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 C2orf92A0A1B0GVN3 265 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 ATP6AP2A0A1C7CYW4 349 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 FAM90A20PA6NIJ5 464 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 OR6C76A6NM76 312 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 A8MVJ9 347 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 NPIPB8E9PQR5 432 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 H0YAE9 185 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 LSM1O15116 133 aaKnown RBP5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 ITM2AO43736 263 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 NME2P1O60361 137 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 PEX11AO75192 247 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 LYPLA1O75608 230 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 ATP6AP2O75787 350 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 OR6B1O95007 311 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 BGNP21810 368 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 GNLYP22749 145 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 TACR1P25103 407 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 SSTR4P31391 388 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 MPIP34949 423 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 PTGER1P34995 402 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 ADMP35318 185 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 SOX3P41225 446 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 PTDSS1P48651 473 aaKnown RBP5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 SLC1A6P48664 564 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 SLC18A1P54219 525 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 SLC37A1P57057 533 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 ABCE1P61221 599 aaKnown RBP5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 RPL38P63173 70 aaKnown RBP5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 SCN1BQ07699 218 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 FUT7Q11130 342 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 STX3Q13277 289 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 KIAA0040Q15053 153 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 EBPQ15125 230 aaKnown RBP5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 ANKDD1AQ495B1 522 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 ATP6AP1LQ52LC2 224 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 RFTN2Q52LD8 501 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 PIGGQ5H8A4 983 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 CES4AQ5XG92 561 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 SLC25A25Q6KCM7 469 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 HMBOX1Q6NT76 420 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 OPN5Q6U736 354 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 IL20RBQ6UXL0 311 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 RTL4Q6ZR62 310 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 Q6ZSR9 355 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 TICAM1Q8IUC6 712 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 C9orf40Q8IXQ3 194 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 KIRREL3Q8IZU9 778 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 CYP4Z2PQ8N1L4 340 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 POC5Q8NA72 575 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 FAM98AQ8NCA5 519 aaKnown RBP5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 OR7G1Q8NGA0 311 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 OR2T11Q8NH01 316 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 SLC22A8Q8TCC7 542 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 ABHD5Q8WTS1 349 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 ZFAND2BQ8WV99 257 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 STON2Q8WXE9 905 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 TLCD1Q96CP7 247 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 CNRIP1Q96F85 164 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 SCMH1Q96GD3 660 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 PPP3R2Q96LZ3 170 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 ZNF681Q96N22 645 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 TAAR6Q96RI8 345 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 RASL10BQ96S79 203 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 ATP6V0BQ99437 205 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 SPXQ9BT56 116 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 HES7Q9BYE0 225 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 WWTR1Q9GZV5 400 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 SERHL2Q9H4I8 314 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 CLMPQ9H6B4 373 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 MYNNQ9NPC7 610 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 SNTG1Q9NSN8 517 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 ALKBH4Q9NXW9 302 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 BCAP29Q9UHQ4 241 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 ZDHHC2Q9UIJ5 367 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 NTNG1Q9Y2I2 539 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 TMED5Q9Y3A6 229 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 RAP2CQ9Y3L5 183 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 KALRNO60229 2985 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 SPTA1P02549 2419 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 CFAP46Q8IYW2 2715 aa5.32□□□□□ -1.56
HMGB1P42-201ENST00000532126 CCDC88CQ9P219 2028 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 TNRC6AQ8NDV7 1962 aaKnown RBP5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 COL6A6A6NMZ7 2263 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 BSNQ9UPA5 3926 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 MED13Q9UHV7 2174 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 ANKUB1A6NFN9 424 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 KLRC4-KLRK1H3BQV0 150 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 HNRNPRO43390 633 aaKnown RBP5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 BCAS2O75934 225 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 CBX6O95503 412 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 CLPSP04118 112 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 CT62P0C5K7 136 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 GLI4P10075 376 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 BCKDHAP12694 445 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 H2AFXP16104 143 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 DDX5P17844 614 aaKnown RBP5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 SDC1P18827 310 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms