RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 MISPQ8IVT2 679 aa15.09■□□□□ 0.01
CPSF1-207ENST00000531727 OR6K3Q8NGY3 331 aa15.09■□□□□ 0.01
CPSF1-207ENST00000531727 OR10D3Q8NH80 312 aa15.09■□□□□ 0.01
CPSF1-207ENST00000531727 OR2W6PQ8NHA6 318 aa15.09■□□□□ 0.01
CPSF1-207ENST00000531727 JADE3Q92613 823 aa15.09■□□□□ 0.01
CPSF1-207ENST00000531727 CAVIN3Q969G5 261 aa15.09■□□□□ 0.01
CPSF1-207ENST00000531727 FAM120BQ96EK7 910 aaKnown RBP15.09■□□□□ 0.01
CPSF1-207ENST00000531727 PIK3IP1Q96FE7 263 aa15.09■□□□□ 0.01
CPSF1-207ENST00000531727 OTUB1Q96FW1 271 aaPredicted RBP15.09■□□□□ 0.01
CPSF1-207ENST00000531727 SH3YL1Q96HL8 342 aaPredicted RBP15.09■□□□□ 0.01
CPSF1-207ENST00000531727 GMPPAQ96IJ6 420 aaPredicted RBP15.09■□□□□ 0.01
CPSF1-207ENST00000531727 PPP3R2Q96LZ3 170 aa15.09■□□□□ 0.01
CPSF1-207ENST00000531727 RNF145Q96MT1 663 aa15.09■□□□□ 0.01
CPSF1-207ENST00000531727 BTBD2Q9BX70 525 aa15.09■□□□□ 0.01
CPSF1-207ENST00000531727 L2HGDHQ9H9P8 463 aa15.09■□□□□ 0.01
CPSF1-207ENST00000531727 MED17Q9NVC6 651 aa15.09■□□□□ 0.01
CPSF1-207ENST00000531727 SLC17A7Q9P2U7 560 aa15.09■□□□□ 0.01
CPSF1-207ENST00000531727 GIMAP2Q9UG22 337 aa15.09■□□□□ 0.01
CPSF1-207ENST00000531727 EMC9Q9Y3B6 208 aa15.09■□□□□ 0.01
CPSF1-207ENST00000531727 SS18L1O75177 396 aaPredicted RBP15.08■□□□□ 0
CPSF1-207ENST00000531727 PLGP00747 810 aaPredicted RBP15.08■□□□□ 0
CPSF1-207ENST00000531727 HMGN2P05204 90 aaKnown RBP15.08■□□□□ 0
CPSF1-207ENST00000531727 MAPK1P28482 360 aa15.08■□□□□ 0
CPSF1-207ENST00000531727 POU6F2P78424 691 aaPredicted RBP15.08■□□□□ 0
CPSF1-207ENST00000531727 CCNJQ5T5M9 372 aa15.08■□□□□ 0
CPSF1-207ENST00000531727 SHEQ5VZ18 495 aa15.08■□□□□ 0
CPSF1-207ENST00000531727 BIVMQ86UB2 503 aa15.08■□□□□ 0
CPSF1-207ENST00000531727 OR7A2PQ8NGA2 310 aa15.08■□□□□ 0
CPSF1-207ENST00000531727 OR2V1Q8NHB1 315 aa15.08■□□□□ 0
CPSF1-207ENST00000531727 TRIM44Q96DX7 344 aaPredicted RBP15.08■□□□□ 0
CPSF1-207ENST00000531727 MARK4Q96L34 752 aa15.08■□□□□ 0
CPSF1-207ENST00000531727 STACQ99469 402 aa15.08■□□□□ 0
CPSF1-207ENST00000531727 PIP5K1AQ99755 562 aa15.08■□□□□ 0
CPSF1-207ENST00000531727 KLHL4Q9C0H6 718 aa15.08■□□□□ 0
CPSF1-207ENST00000531727 PIGUQ9H490 435 aa15.08■□□□□ 0
CPSF1-207ENST00000531727 PLSCR4Q9NRQ2 329 aa15.08■□□□□ 0
CPSF1-207ENST00000531727 DUSP22Q9NRW4 184 aa15.08■□□□□ 0
CPSF1-207ENST00000531727 MCTS1Q9ULC4 181 aaKnown RBP15.08■□□□□ 0
CPSF1-207ENST00000531727 CLEC4AQ9UMR7 237 aa15.08■□□□□ 0
CPSF1-207ENST00000531727 UQCRHLA0A096LP55 91 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 ADAMDEC1O15204 470 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 CXCL13O43927 109 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 PEX11AO75192 247 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 SYNGR4O95473 234 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 NUDT17P0C025 328 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 LAMP1P11279 417 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 IL11P20809 199 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 ME2P23368 584 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 CTBP2P56545 445 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 LASP1Q14847 261 aaKnown RBP15.07■□□□□ 0
CPSF1-207ENST00000531727 CD226Q15762 336 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 ACKR1Q16570 336 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 EXOC3L2Q2M3D2 409 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 CDC73Q6P1J9 531 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 ZCCHC23Q6ZST2 131 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 C22orf34Q6ZV56 151 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 ESPNLQ6ZVH7 1005 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 B4GALNT2Q8NHY0 566 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 POC1BQ8TC44 478 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 AGR3Q8TD06 166 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 OR5P2Q8WZ92 322 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 CDS1Q92903 461 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 PIGTQ969N2 578 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 ZC3HAV1LQ96H79 300 aaKnown RBP15.07■□□□□ 0
CPSF1-207ENST00000531727 C18orf12Q96KH6 178 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 KLHDC3Q9BQ90 382 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 UBTD1Q9HAC8 227 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 GLRX2Q9NS18 164 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 GIN1Q9NXP7 522 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 LGALS13Q9UHV8 139 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 SNX8Q9Y5X2 465 aa15.07■□□□□ 0
CPSF1-207ENST00000531727 FLNAP21333 2647 aaKnown RBP15.06■□□□□ 0
CPSF1-207ENST00000531727 A0A0J9YW62 118 aa15.06■□□□□ 0
CPSF1-207ENST00000531727 TNFSF11O14788 317 aa15.06■□□□□ 0
CPSF1-207ENST00000531727 ARHGEF9O43307 516 aa15.06■□□□□ 0
CPSF1-207ENST00000531727 SMPD2O60906 423 aa15.06■□□□□ 0
CPSF1-207ENST00000531727 SPAG7O75391 227 aa15.06■□□□□ 0
CPSF1-207ENST00000531727 OPN1LWP04000 364 aa15.06■□□□□ 0
CPSF1-207ENST00000531727 LINGO3P0C6S8 592 aa15.06■□□□□ 0
CPSF1-207ENST00000531727 ATP6V1C1P21283 382 aa15.06■□□□□ 0
CPSF1-207ENST00000531727 FPR1P21462 350 aa15.06■□□□□ 0
CPSF1-207ENST00000531727 LOXP28300 417 aaPredicted RBP15.06■□□□□ 0
CPSF1-207ENST00000531727 SERPINB5P36952 375 aa15.06■□□□□ 0
CPSF1-207ENST00000531727 PTGR1Q14914 329 aa15.06■□□□□ 0
CPSF1-207ENST00000531727 ATP6AP1LQ52LC2 224 aa15.06■□□□□ 0
CPSF1-207ENST00000531727 ANKRD34AQ69YU3 496 aa15.06■□□□□ 0
CPSF1-207ENST00000531727 HBMQ6B0K9 141 aa15.06■□□□□ 0
CPSF1-207ENST00000531727 MTERF4Q7Z6M4 381 aaKnown RBP15.06■□□□□ 0
CPSF1-207ENST00000531727 LRRC75A-AS1Q8N1F1 130 aa15.06■□□□□ 0
CPSF1-207ENST00000531727 NATD1Q8N6N6 113 aa15.06■□□□□ 0
CPSF1-207ENST00000531727 PSMA8Q8TAA3 256 aa15.06■□□□□ 0
CPSF1-207ENST00000531727 TCP10LQ8TDR4 215 aa15.06■□□□□ 0
CPSF1-207ENST00000531727 CHMP6Q96FZ7 201 aa15.06■□□□□ 0
CPSF1-207ENST00000531727 C3orf30Q96M34 536 aa15.06■□□□□ 0
CPSF1-207ENST00000531727 HS3ST6Q96QI5 342 aa15.06■□□□□ 0
CPSF1-207ENST00000531727 C1orf50Q9BV19 199 aa15.06■□□□□ 0
CPSF1-207ENST00000531727 ACTRT3Q9BYD9 372 aa15.06■□□□□ 0
CPSF1-207ENST00000531727 TMEM185BQ9H7F4 350 aa15.06■□□□□ 0
CPSF1-207ENST00000531727 ANKZF1Q9H8Y5 726 aa15.06■□□□□ 0
CPSF1-207ENST00000531727 ATAD3AQ9NVI7 634 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms