RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 TRIM8Q9BZR9 551 aa8.22□□□□□ -1.09
CMTM1-210ENST00000528441 PIGUQ9H490 435 aa8.22□□□□□ -1.09
CMTM1-210ENST00000528441 TMEM185BQ9H7F4 350 aa8.22□□□□□ -1.09
CMTM1-210ENST00000528441 MANSC1Q9H8J5 431 aa8.22□□□□□ -1.09
CMTM1-210ENST00000528441 DUSP22Q9NRW4 184 aa8.22□□□□□ -1.09
CMTM1-210ENST00000528441 SIRT3Q9NTG7 399 aaPredicted RBP8.22□□□□□ -1.09
CMTM1-210ENST00000528441 THAP1Q9NVV9 213 aa8.22□□□□□ -1.09
CMTM1-210ENST00000528441 ZNF446Q9NWS9 450 aa8.22□□□□□ -1.09
CMTM1-210ENST00000528441 ZNF629Q9UEG4 869 aaPredicted RBP8.22□□□□□ -1.09
CMTM1-210ENST00000528441 FOXD3Q9UJU5 478 aaPredicted RBP8.22□□□□□ -1.09
CMTM1-210ENST00000528441 MCTS1Q9ULC4 181 aaKnown RBP8.22□□□□□ -1.09
CMTM1-210ENST00000528441 HCFC1P51610 2035 aa8.22□□□□□ -1.09
CMTM1-210ENST00000528441 NAV2Q8IVL1 2488 aa8.22□□□□□ -1.09
CMTM1-210ENST00000528441 MED12Q93074 2177 aa8.21□□□□□ -1.09
CMTM1-210ENST00000528441 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 MBD3L4A6NDZ8 208 aaPredicted RBP8.21□□□□□ -1.1
CMTM1-210ENST00000528441 MBD3L3A6NE82 208 aaPredicted RBP8.21□□□□□ -1.1
CMTM1-210ENST00000528441 TUBAL3A6NHL2 446 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 MBD3L5A6NJ08 208 aaPredicted RBP8.21□□□□□ -1.1
CMTM1-210ENST00000528441 DUXAA6NLW8 204 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 ALG1L2C9J202 215 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 C9JVG2 144 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 E9PBE3 544 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 SLCO1B7G3V0H7 640 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 LINC01387J3KSC0 135 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 HDAC3O15379 428 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 DIAPH2O60879 1101 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 SOX30O94993 753 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 CPN1P15169 458 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 ZNF708P17019 499 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 TBXA2RP21731 343 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 EPHA3P29320 983 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 SFTPDP35247 375 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 FRKP42685 505 aaPredicted RBP8.21□□□□□ -1.1
CMTM1-210ENST00000528441 KHKP50053 298 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 GFRA1P56159 465 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 CTBP2P56545 445 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 STX1BP61266 288 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 HBA1P69905 142 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 CASP8Q14790 479 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 PON3Q15166 354 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.21□□□□□ -1.1
CMTM1-210ENST00000528441 DPY19L1Q2PZI1 675 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 SMU1Q2TAY7 513 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 FAM174BQ3ZCQ3 159 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 SPANXN4Q5MJ08 99 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 TNFAIP8L2Q6P589 184 aaPredicted RBP8.21□□□□□ -1.1
CMTM1-210ENST00000528441 POMZP3Q6PJE2 187 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 DNAJC14Q6Y2X3 702 aaPredicted RBP8.21□□□□□ -1.1
CMTM1-210ENST00000528441 SEM1Q6ZVN7 128 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 HDXQ7Z353 690 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 C6orf120Q7Z4R8 191 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 CDH24Q86UP0 819 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 FADS6Q8N9I5 356 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 MBD3L2Q8NHZ7 208 aaPredicted RBP8.21□□□□□ -1.1
CMTM1-210ENST00000528441 ZNF563Q8TA94 476 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 XAGE5Q8WWM1 108 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 GIMAP5Q96F15 307 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 C14orf79Q96F83 325 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 MARK4Q96L34 752 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 RNF145Q96MT1 663 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 PANX1Q96RD7 426 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 SORT1Q99523 831 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 SLC35A5Q9BS91 424 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 POLDIP3Q9BY77 421 aaKnown RBP8.21□□□□□ -1.1
CMTM1-210ENST00000528441 HOXD1Q9GZZ0 328 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 ENKD1Q9H0I2 346 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 OR51I1Q9H343 314 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 TMBIM4Q9HC24 238 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 MCCC2Q9HCC0 563 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 DNAJB12Q9NXW2 375 aaKnown RBP8.21□□□□□ -1.1
CMTM1-210ENST00000528441 KCNN3Q9UGI6 736 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 ZNF337Q9Y3M9 751 aa8.21□□□□□ -1.1
CMTM1-210ENST00000528441 A0A087WZY1 265 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 TMEM247A6NEH6 219 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 GJE1A6NN92 205 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 RNASET2O00584 256 aaKnown RBP8.2□□□□□ -1.1
CMTM1-210ENST00000528441 POLR3GO15318 223 aaPredicted RBP8.2□□□□□ -1.1
CMTM1-210ENST00000528441 ZIC3O60481 467 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 AGR2O95994 175 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 AK1P00568 194 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 DHRS4L1P0CG22 281 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 OR12D1P0DN82 309 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 UBL4AP11441 157 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 FCGR2AP12318 317 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 CAPN3P20807 821 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 UQCRC2P22695 453 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 SLC7A1P30825 629 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 LCN1P31025 176 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 CEACAM8P31997 349 aaPredicted RBP8.2□□□□□ -1.1
CMTM1-210ENST00000528441 GAS1P54826 345 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 CLDN15P56746 228 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 CLDN18P56856 261 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 EEF1A1P68104 462 aaKnown RBP8.2□□□□□ -1.1
CMTM1-210ENST00000528441 POU4F3Q15319 338 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 EXOC3L2Q2M3D2 409 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 EEF1A1P5Q5VTE0 462 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 ZNF621Q6ZSS3 439 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 SPATA19Q7Z5L4 167 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 ZAR1Q86SH2 424 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms