RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 HCRTR2O43614 444 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 TYROBPO43914 113 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 LYPLA1O75608 230 aaPredicted RBP9.46□□□□□ -0.9
CPSF1-203ENST00000527916 SLU7O95391 586 aaKnown RBP9.46□□□□□ -0.9
CPSF1-203ENST00000527916 BPGMP07738 259 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 NGFRP08138 427 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 MAPK1P28482 360 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 ETV4P43268 484 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 STARP49675 285 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 EEFSECP57772 596 aaKnown RBP9.46□□□□□ -0.9
CPSF1-203ENST00000527916 RPL38P63173 70 aaKnown RBP9.46□□□□□ -0.9
CPSF1-203ENST00000527916 HSPB3Q12988 150 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 ZNF385BQ569K4 471 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 XKR7Q5GH72 579 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 BEX5Q5H9J7 111 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 EXOSC6Q5RKV6 272 aaKnown RBP9.46□□□□□ -0.9
CPSF1-203ENST00000527916 ZNF704Q6ZNC4 412 aaPredicted RBP9.46□□□□□ -0.9
CPSF1-203ENST00000527916 CHMP1BQ7LBR1 199 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 ZNF550Q7Z398 422 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 DDIASQ8IXT1 998 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 ZNF611Q8N823 705 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 NUP43Q8NFH3 380 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 DUSP19Q8WTR2 217 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 GFM2Q969S9 779 aaKnown RBP9.46□□□□□ -0.9
CPSF1-203ENST00000527916 CIDECQ96AQ7 238 aaPredicted RBP9.46□□□□□ -0.9
CPSF1-203ENST00000527916 STARD4Q96DR4 205 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 GIMAP5Q96F15 307 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 MARK4Q96L34 752 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 SFXN2Q96NB2 322 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 ZIM3Q96PE6 472 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 PIGQQ9BRB3 760 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 MECRQ9BV79 373 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 RTN4RQ9BZR6 473 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 DSN1Q9H410 356 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 GIN1Q9NXP7 522 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 DKKL1Q9UK85 242 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 FIS1Q9Y3D6 152 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 CR1P17927 2039 aa9.46□□□□□ -0.9
CPSF1-203ENST00000527916 TMEM233B4DJY2 109 aa9.45□□□□□ -0.9
CPSF1-203ENST00000527916 ALG1L2C9J202 215 aa9.45□□□□□ -0.9
CPSF1-203ENST00000527916 EMC8O43402 210 aa9.45□□□□□ -0.9
CPSF1-203ENST00000527916 AKAP10O43572 662 aa9.45□□□□□ -0.9
CPSF1-203ENST00000527916 SCO2O43819 266 aa9.45□□□□□ -0.9
CPSF1-203ENST00000527916 SPAG7O75391 227 aa9.45□□□□□ -0.9
CPSF1-203ENST00000527916 TNFRSF21O75509 655 aa9.45□□□□□ -0.9
CPSF1-203ENST00000527916 SNUPNO95149 360 aaKnown RBP9.45□□□□□ -0.9
CPSF1-203ENST00000527916 UTS2O95399 124 aa9.45□□□□□ -0.9
CPSF1-203ENST00000527916 HSPA4LO95757 839 aa9.45□□□□□ -0.9
CPSF1-203ENST00000527916 CREB1P16220 341 aa9.45□□□□□ -0.9
CPSF1-203ENST00000527916 TBXA2RP21731 343 aa9.45□□□□□ -0.9
CPSF1-203ENST00000527916 RPS4XP62701 263 aaKnown RBP9.45□□□□□ -0.9
CPSF1-203ENST00000527916 FGFBP1Q14512 234 aa9.45□□□□□ -0.9
CPSF1-203ENST00000527916 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.45□□□□□ -0.9
CPSF1-203ENST00000527916 SMU1Q2TAY7 513 aa9.45□□□□□ -0.9
CPSF1-203ENST00000527916 GALNTL6Q49A17 601 aa9.45□□□□□ -0.9
CPSF1-203ENST00000527916 ATP6AP1LQ52LC2 224 aa9.45□□□□□ -0.9
CPSF1-203ENST00000527916 C6orf136Q5SQH8 315 aa9.45□□□□□ -0.9
CPSF1-203ENST00000527916 ANKRD26P1Q6NSI1 321 aa9.45□□□□□ -0.9
CPSF1-203ENST00000527916 ZNF474Q6S9Z5 364 aaPredicted RBP9.45□□□□□ -0.9
CPSF1-203ENST00000527916 MARCH3Q86UD3 253 aa9.45□□□□□ -0.9
CPSF1-203ENST00000527916 PSMA8Q8TAA3 256 aa9.45□□□□□ -0.9
CPSF1-203ENST00000527916 GPR151Q8TDV0 419 aa9.45□□□□□ -0.9
CPSF1-203ENST00000527916 COQ8BQ96D53 544 aa9.45□□□□□ -0.9
CPSF1-203ENST00000527916 C1GALT1C1Q96EU7 318 aa9.45□□□□□ -0.9
CPSF1-203ENST00000527916 MS4A4EQ96PG1 132 aa9.45□□□□□ -0.9
CPSF1-203ENST00000527916 TBL1XR1Q9BZK7 514 aa9.45□□□□□ -0.9
CPSF1-203ENST00000527916 SSU72Q9NP77 194 aaKnown RBP9.45□□□□□ -0.9
CPSF1-203ENST00000527916 MED11Q9P086 117 aa9.45□□□□□ -0.9
CPSF1-203ENST00000527916 ZDHHC2Q9UIJ5 367 aa9.45□□□□□ -0.9
CPSF1-203ENST00000527916 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.44□□□□□ -0.9
CPSF1-203ENST00000527916 A0A1W2PRB8 838 aa9.44□□□□□ -0.9
CPSF1-203ENST00000527916 GXYLT2A0PJZ3 443 aa9.44□□□□□ -0.9
CPSF1-203ENST00000527916 SLC22A20A6NK97 555 aa9.44□□□□□ -0.9
CPSF1-203ENST00000527916 HS3ST1O14792 307 aa9.44□□□□□ -0.9
CPSF1-203ENST00000527916 SCAMP2O15127 329 aaKnown RBP9.44□□□□□ -0.9
CPSF1-203ENST00000527916 ZNF500O60304 480 aaPredicted RBP9.44□□□□□ -0.9
CPSF1-203ENST00000527916 PEX11AO75192 247 aa9.44□□□□□ -0.9
CPSF1-203ENST00000527916 KCNK2O95069 426 aa9.44□□□□□ -0.9
CPSF1-203ENST00000527916 ANGPTL1O95841 491 aa9.44□□□□□ -0.9
CPSF1-203ENST00000527916 IGKV1D-16P01601 117 aa9.44□□□□□ -0.9
CPSF1-203ENST00000527916 PPP3CBP16298 524 aa9.44□□□□□ -0.9
CPSF1-203ENST00000527916 HK1P19367 917 aa9.44□□□□□ -0.9
CPSF1-203ENST00000527916 LOXP28300 417 aaPredicted RBP9.44□□□□□ -0.9
CPSF1-203ENST00000527916 ARRB2P32121 409 aa9.44□□□□□ -0.9
CPSF1-203ENST00000527916 CCKARP32238 428 aa9.44□□□□□ -0.9
CPSF1-203ENST00000527916 HPCAL1P37235 193 aa9.44□□□□□ -0.9
CPSF1-203ENST00000527916 SERPINB4P48594 390 aa9.44□□□□□ -0.9
CPSF1-203ENST00000527916 PRIM2P49643 509 aa9.44□□□□□ -0.9
CPSF1-203ENST00000527916 PRKAG1P54619 331 aa9.44□□□□□ -0.9
CPSF1-203ENST00000527916 C21orf58P58505 322 aa9.44□□□□□ -0.9
CPSF1-203ENST00000527916 TMEM44Q2T9K0 475 aa9.44□□□□□ -0.9
CPSF1-203ENST00000527916 KRTAP24-1Q3LI83 254 aa9.44□□□□□ -0.9
CPSF1-203ENST00000527916 MFSD12Q6NUT3 480 aa9.44□□□□□ -0.9
CPSF1-203ENST00000527916 VWA1Q6PCB0 445 aa9.44□□□□□ -0.9
CPSF1-203ENST00000527916 PLXDC2Q6UX71 529 aa9.44□□□□□ -0.9
CPSF1-203ENST00000527916 APOOLQ6UXV4 268 aa9.44□□□□□ -0.9
CPSF1-203ENST00000527916 ZCCHC23Q6ZST2 131 aa9.44□□□□□ -0.9
CPSF1-203ENST00000527916 SLC16A11Q8NCK7 471 aa9.44□□□□□ -0.9
CPSF1-203ENST00000527916 OR4C3Q8NH37 302 aa9.44□□□□□ -0.9
CPSF1-203ENST00000527916 CLHC1Q8NHS4 586 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms