RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 GNA13Q14344 377 aa11.77□□□□□ -0.53
SMPD1-202ENST00000526280 CD226Q15762 336 aa11.77□□□□□ -0.53
SMPD1-202ENST00000526280 MAPK14Q16539 360 aa11.77□□□□□ -0.53
SMPD1-202ENST00000526280 PDZK1Q5T2W1 519 aa11.77□□□□□ -0.53
SMPD1-202ENST00000526280 GCNT6Q5T4J0 391 aa11.77□□□□□ -0.53
SMPD1-202ENST00000526280 TRILQ7L0X0 811 aa11.77□□□□□ -0.53
SMPD1-202ENST00000526280 MISPQ8IVT2 679 aa11.77□□□□□ -0.53
SMPD1-202ENST00000526280 CHERPQ8IWX8 916 aaKnown RBP11.77□□□□□ -0.53
SMPD1-202ENST00000526280 GHDCQ8N2G8 530 aa11.77□□□□□ -0.53
SMPD1-202ENST00000526280 GATSQ8NAP1 163 aa11.77□□□□□ -0.53
SMPD1-202ENST00000526280 OR2M3Q8NG83 312 aa11.77□□□□□ -0.53
SMPD1-202ENST00000526280 OR4K17Q8NGC6 315 aa11.77□□□□□ -0.53
SMPD1-202ENST00000526280 MAL2Q969L2 176 aa11.77□□□□□ -0.53
SMPD1-202ENST00000526280 SLC39A3Q9BRY0 314 aa11.77□□□□□ -0.53
SMPD1-202ENST00000526280 TRIM8Q9BZR9 551 aa11.77□□□□□ -0.53
SMPD1-202ENST00000526280 DSN1Q9H410 356 aa11.77□□□□□ -0.53
SMPD1-202ENST00000526280 RUBCNLQ9H714 662 aa11.77□□□□□ -0.53
SMPD1-202ENST00000526280 CALML5Q9NZT1 146 aa11.77□□□□□ -0.53
SMPD1-202ENST00000526280 MED11Q9P086 117 aa11.77□□□□□ -0.53
SMPD1-202ENST00000526280 MRPS18CQ9Y3D5 142 aaKnown RBP11.77□□□□□ -0.53
SMPD1-202ENST00000526280 LIPGQ9Y5X9 500 aa11.77□□□□□ -0.53
SMPD1-202ENST00000526280 DSPPQ9NZW4 1301 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 A0A0G2JPF8 293 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 CENPVL1A0A0U1RR11 272 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 A0A1B0GTH9 108 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 TMEM247A6NEH6 219 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 SERINC4A6NH21 518 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 AGAP5A6NIR3 686 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 HNRNPCL2B2RXH8 293 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 HNRNPCL3B7ZW38 293 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 AIM2O14862 343 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 SUSD5O60279 629 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 ZIC3O60481 467 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 HCN1O60741 890 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 HNRNPCL1O60812 293 aaKnown RBP11.76□□□□□ -0.53
SMPD1-202ENST00000526280 HNRNPCL4P0DMR1 293 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 T-ENOLP0DO92 83 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 ARAFP10398 606 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 ENDOUP21128 410 aaKnown RBP11.76□□□□□ -0.53
SMPD1-202ENST00000526280 MSX1P28360 303 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 SRD5A2P31213 254 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 ADH7P40394 386 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 UQCRFS1P47985 274 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 DSCR4P56555 118 aaPredicted RBP11.76□□□□□ -0.53
SMPD1-202ENST00000526280 HSF1Q00613 529 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 ELOAQ14241 798 aaKnown RBP11.76□□□□□ -0.53
SMPD1-202ENST00000526280 TOMM20Q15388 145 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 ADRM1Q16186 407 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 PRAMEF8Q5VWM4 474 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 PRAMEF7Q5VXH5 474 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 FAM91A1Q658Y4 838 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 ARHGAP11AQ6P4F7 1023 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 FGD2Q7Z6J4 655 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 METTL25Q8N6Q8 603 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 FAM83FQ8NEG4 500 aaPredicted RBP11.76□□□□□ -0.53
SMPD1-202ENST00000526280 OR8J3Q8NGG0 315 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 PHOSPHO1Q8TCT1 267 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 DTNBP1Q96EV8 351 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 TMEM19Q96HH6 336 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 SH3GL1Q99961 368 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 TREX2Q9BQ50 279 aaPredicted RBP11.76□□□□□ -0.53
SMPD1-202ENST00000526280 QRSL1Q9H0R6 528 aaKnown RBP11.76□□□□□ -0.53
SMPD1-202ENST00000526280 TMEM38AQ9H6F2 299 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 LDAHQ9H6V9 325 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 KAT8Q9H7Z6 458 aaKnown RBP11.76□□□□□ -0.53
SMPD1-202ENST00000526280 EFCAB1Q9HAE3 211 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 BCL2L10Q9HD36 194 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 SUCOQ9UBS9 1254 aaKnown RBP11.76□□□□□ -0.53
SMPD1-202ENST00000526280 ZNF835Q9Y2P0 537 aa11.76□□□□□ -0.53
SMPD1-202ENST00000526280 TRGV5A0A0B4J1U4 118 aa11.75□□□□□ -0.53
SMPD1-202ENST00000526280 AQP7O14520 342 aa11.75□□□□□ -0.53
SMPD1-202ENST00000526280 MGRN1O60291 552 aa11.75□□□□□ -0.53
SMPD1-202ENST00000526280 RPS4Y1P22090 263 aaKnown RBP11.75□□□□□ -0.53
SMPD1-202ENST00000526280 DPP4P27487 766 aa11.75□□□□□ -0.53
SMPD1-202ENST00000526280 RNF144AP50876 292 aaPredicted RBP11.75□□□□□ -0.53
SMPD1-202ENST00000526280 RBPJQ06330 500 aa11.75□□□□□ -0.53
SMPD1-202ENST00000526280 FGFBP1Q14512 234 aa11.75□□□□□ -0.53
SMPD1-202ENST00000526280 GANABQ14697 944 aaKnown RBP11.75□□□□□ -0.53
SMPD1-202ENST00000526280 ZNF630Q2M218 657 aaPredicted RBP11.75□□□□□ -0.53
SMPD1-202ENST00000526280 EIPR1Q53HC9 387 aa11.75□□□□□ -0.53
SMPD1-202ENST00000526280 RABL3Q5HYI8 236 aa11.75□□□□□ -0.53
SMPD1-202ENST00000526280 SERPINA11Q86U17 422 aa11.75□□□□□ -0.53
SMPD1-202ENST00000526280 YRDCQ86U90 279 aaKnown RBP11.75□□□□□ -0.53
SMPD1-202ENST00000526280 PTOV1Q86YD1 416 aa11.75□□□□□ -0.53
SMPD1-202ENST00000526280 ZNF614Q8N883 585 aa11.75□□□□□ -0.53
SMPD1-202ENST00000526280 OR10A6Q8NH74 314 aa11.75□□□□□ -0.53
SMPD1-202ENST00000526280 B4GALNT2Q8NHY0 566 aa11.75□□□□□ -0.53
SMPD1-202ENST00000526280 NEIL3Q8TAT5 605 aa11.75□□□□□ -0.53
SMPD1-202ENST00000526280 C1GALT1C1Q96EU7 318 aa11.75□□□□□ -0.53
SMPD1-202ENST00000526280 NSL1Q96IY1 281 aa11.75□□□□□ -0.53
SMPD1-202ENST00000526280 RAB3IPQ96QF0 476 aaPredicted RBP11.75□□□□□ -0.53
SMPD1-202ENST00000526280 GPATCH1Q9BRR8 931 aaKnown RBP11.75□□□□□ -0.53
SMPD1-202ENST00000526280 OR2B2Q9GZK3 357 aa11.75□□□□□ -0.53
SMPD1-202ENST00000526280 SLC6A15Q9H2J7 730 aa11.75□□□□□ -0.53
SMPD1-202ENST00000526280 PTGES2Q9H7Z7 377 aa11.75□□□□□ -0.53
SMPD1-202ENST00000526280 RELNP78509 3460 aa11.74□□□□□ -0.53
SMPD1-202ENST00000526280 OR14I1A6ND48 311 aa11.74□□□□□ -0.53
SMPD1-202ENST00000526280 C5orf58C9J3I9 102 aa11.74□□□□□ -0.53
SMPD1-202ENST00000526280 GTPBP1O00178 669 aaKnown RBP11.74□□□□□ -0.53
SMPD1-202ENST00000526280 ZNHIT1O43257 154 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms