RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 ZNF730Q6ZMV8 503 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 BANPQ8N9N5 519 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 MSANTD4Q8NCY6 345 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 LPCAT1Q8NF37 534 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 ANKRD20A12PQ8NF67 263 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 ST7LQ8TDW4 575 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 LIPHQ8WWY8 451 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 SHC3Q92529 594 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 FGF14Q92915 247 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 FBXO32Q969P5 355 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 PDLIM5Q96HC4 596 aaKnown RBP3.17□□□□□ -1.9
CD44-219ENST00000525685 ALKBH3Q96Q83 286 aaPredicted RBP3.17□□□□□ -1.9
CD44-219ENST00000525685 ERGIC2Q96RQ1 377 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 PSMB7Q99436 277 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 ATF6BQ99941 703 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 SOSTQ9BQB4 213 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 CCM2Q9BSQ5 444 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 RPP25Q9BUL9 199 aaKnown RBP3.17□□□□□ -1.9
CD44-219ENST00000525685 DUSP16Q9BY84 665 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 PLA2G2FQ9BZM2 168 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 PARLQ9H300 379 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 TSPY26PQ9H489 355 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 MOB1AQ9H8S9 216 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 NMUR1Q9HB89 426 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 FAM212BQ9NTI7 297 aaPredicted RBP3.17□□□□□ -1.9
CD44-219ENST00000525685 SUN2Q9UH99 717 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 PILRAQ9UKJ1 303 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 DUSP12Q9UNI6 340 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 KCNK6Q9Y257 313 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 ASB3Q9Y575 518 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 MYO7AQ13402 2215 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 DOCK6Q96HP0 2047 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 LAMA2P24043 3122 aaKnown RBP3.17□□□□□ -1.9
CD44-219ENST00000525685 ANAPC1Q9H1A4 1944 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 TRANK1O15050 2925 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 KMT2EQ8IZD2 1858 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 IGLV4-3A0A075B6K6 122 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 IGHV3OR16-10A0A075B7F0 116 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 TRAV19A0A0A6YYK7 116 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 TRGV8A0A0C4DH27 118 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 ZNF840PA6NDX5 716 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 GOLGA6L19H0YKK7 550 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 XPO1O14980 1071 aaKnown RBP3.16□□□□□ -1.9
CD44-219ENST00000525685 FMO6PO60774 539 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 CRLF1O75462 422 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 ECI2O75521 394 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 OAS1P00973 400 aaKnown RBP3.16□□□□□ -1.9
CD44-219ENST00000525685 ZDHHC11BP0C7U3 371 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 CCDC172P0C7W6 258 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 ANPEPP15144 967 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 UCHL3P15374 230 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 CYP11B1P15538 503 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 ID1P41134 155 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 TRPC1P48995 793 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 PGFP49763 221 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 TKTL1P51854 596 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 CRYBA2P53672 197 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 POLR2FP61218 127 aaKnown RBP3.16□□□□□ -1.9
CD44-219ENST00000525685 TPM4P67936 248 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 SLC7A9P82251 487 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 UBXN1Q04323 297 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 CD300CQ08708 224 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 ADIGQ0VDE8 80 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 BST2Q10589 180 aaKnown RBP3.16□□□□□ -1.9
CD44-219ENST00000525685 LY6DQ14210 128 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 SYCP1Q15431 976 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 SPHARQ15513 63 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 ZNF77Q15935 545 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 SNAI3Q3KNW1 292 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 DDI2Q5TDH0 399 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 PRAMEF8Q5VWM4 474 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 KCTD11Q693B1 232 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 PMF1Q6P1K2 205 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 VITQ6UXI7 678 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 GPRIN3Q6ZVF9 776 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 SLC47A2Q86VL8 602 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 LAX1Q8IWV1 398 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 LMNTD2Q8IXW0 634 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 FAM71AQ8IYT1 594 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 CMTM8Q8IZV2 173 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 ICA1LQ8NDH6 482 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 TRPV3Q8NET8 790 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 NEK11Q8NG66 645 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 UBA3Q8TBC4 463 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.16□□□□□ -1.9
CD44-219ENST00000525685 PCNPQ8WW12 178 aaKnown RBP3.16□□□□□ -1.9
CD44-219ENST00000525685 ZNF606Q8WXB4 792 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 MRPS31Q92665 395 aaKnown RBP3.16□□□□□ -1.9
CD44-219ENST00000525685 SMARCD2Q92925 531 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 FAM46BQ96A09 425 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 ELSPBP1Q96BH3 223 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 ANKRD9Q96BM1 317 aaPredicted RBP3.16□□□□□ -1.9
CD44-219ENST00000525685 RBM24Q9BX46 236 aaKnown RBP3.16□□□□□ -1.9
CD44-219ENST00000525685 PINK1Q9BXM7 581 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 OSBPL8Q9BZF1 889 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 ULBP1Q9BZM6 244 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 TSPYL1Q9H0U9 437 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 ABCG4Q9H172 646 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 TUBB1Q9H4B7 451 aa3.16□□□□□ -1.9
CD44-219ENST00000525685 FBXO44Q9H4M3 255 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms