RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 ELOVL7A1L3X0 281 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 LRRC3CA6NJW4 275 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 NPIPA7E9PJI5 369 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 TFECO14948 347 aaPredicted RBP17.07■□□□□ 0.32
PTPRK-218ENST00000525459 EIF4E2O60573 245 aaKnown RBP17.07■□□□□ 0.32
PTPRK-218ENST00000525459 FREM3P0C091 2139 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 NPIPA8P0DM63 369 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 UBL4AP11441 157 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 PCBP3P57721 371 aaKnown RBP17.07■□□□□ 0.32
PTPRK-218ENST00000525459 SLC25A3Q00325 362 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 ALDH6A1Q02252 535 aaKnown RBP17.07■□□□□ 0.32
PTPRK-218ENST00000525459 FNDC7Q5VTL7 733 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 C6orf89Q6UWU4 347 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 APOOLQ6UXV4 268 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 DEFB107AQ8IZN7 70 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 PHOSPHO1Q8TCT1 267 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 RASSF5Q8WWW0 418 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 TAAR6Q96RI8 345 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 ADA2Q9NZK5 511 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 KCNE5Q9UJ90 142 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 PRDM4Q9UKN5 801 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 GPC6Q9Y625 555 aaPredicted RBP17.07■□□□□ 0.32
PTPRK-218ENST00000525459 PINLYPA6NC86 204 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 ADAM10O14672 748 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 ZNF264O43296 627 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 CSTAP01040 98 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 CPOXP36551 454 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 DNAL1Q4LDG9 190 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 EIPR1Q53HC9 387 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 SOWAHCQ53LP3 525 aaPredicted RBP17.07■□□□□ 0.32
PTPRK-218ENST00000525459 RPS26P11Q5JNZ5 115 aaPredicted RBP17.07■□□□□ 0.32
PTPRK-218ENST00000525459 CCDC80Q76M96 950 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 MICU2Q8IYU8 434 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 FADS6Q8N9I5 356 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 OR4K17Q8NGC6 315 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 OR52P1PQ8NH57 321 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 FAR1Q8WVX9 515 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 KCTD14Q9BQ13 255 aaPredicted RBP17.07■□□□□ 0.32
PTPRK-218ENST00000525459 EVA1AQ9H8M9 152 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 EXOSC3Q9NQT5 275 aaKnown RBP17.07■□□□□ 0.32
PTPRK-218ENST00000525459 OLAHQ9NV23 265 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 PRPF19Q9UMS4 504 aaKnown RBP17.07■□□□□ 0.32
PTPRK-218ENST00000525459 HEATR5AQ86XA9 2040 aa17.07■□□□□ 0.32
PTPRK-218ENST00000525459 GTPBP1O00178 669 aaKnown RBP17.06■□□□□ 0.32
PTPRK-218ENST00000525459 GNB5O14775 395 aa17.06■□□□□ 0.32
PTPRK-218ENST00000525459 PABPC4LP0CB38 370 aaKnown RBP17.06■□□□□ 0.32
PTPRK-218ENST00000525459 HSD17B1P14061 328 aa17.06■□□□□ 0.32
PTPRK-218ENST00000525459 PPIAP62937 165 aaKnown RBP17.06■□□□□ 0.32
PTPRK-218ENST00000525459 KCNJ10P78508 379 aa17.06■□□□□ 0.32
PTPRK-218ENST00000525459 PMP22Q01453 160 aa17.06■□□□□ 0.32
PTPRK-218ENST00000525459 BNIP1Q12981 228 aa17.06■□□□□ 0.32
PTPRK-218ENST00000525459 CD226Q15762 336 aa17.06■□□□□ 0.32
PTPRK-218ENST00000525459 OLIG3Q7RTU3 272 aa17.06■□□□□ 0.32
PTPRK-218ENST00000525459 IFNEQ86WN2 208 aa17.06■□□□□ 0.32
PTPRK-218ENST00000525459 WDSUB1Q8N9V3 476 aa17.06■□□□□ 0.32
PTPRK-218ENST00000525459 FAM71CQ8NEG0 241 aa17.06■□□□□ 0.32
PTPRK-218ENST00000525459 DUSP19Q8WTR2 217 aa17.06■□□□□ 0.32
PTPRK-218ENST00000525459 NR4A3Q92570 626 aa17.06■□□□□ 0.32
PTPRK-218ENST00000525459 SLC35B4Q969S0 331 aa17.06■□□□□ 0.32
PTPRK-218ENST00000525459 SNRNP40Q96DI7 357 aaKnown RBP17.06■□□□□ 0.32
PTPRK-218ENST00000525459 UBQLN3Q9H347 655 aa17.06■□□□□ 0.32
PTPRK-218ENST00000525459 ZDHHC11Q9H8X9 412 aa17.06■□□□□ 0.32
PTPRK-218ENST00000525459 SEC14L3Q9UDX4 400 aa17.06■□□□□ 0.32
PTPRK-218ENST00000525459 ZNF443Q9Y2A4 671 aaPredicted RBP17.06■□□□□ 0.32
PTPRK-218ENST00000525459 MRPS18CQ9Y3D5 142 aaKnown RBP17.06■□□□□ 0.32
PTPRK-218ENST00000525459 BSNQ9UPA5 3926 aa17.05■□□□□ 0.32
PTPRK-218ENST00000525459 B8ZZF3 427 aa17.05■□□□□ 0.32
PTPRK-218ENST00000525459 EBAG9O00559 213 aa17.05■□□□□ 0.32
PTPRK-218ENST00000525459 SUV39H1O43463 412 aa17.05■□□□□ 0.32
PTPRK-218ENST00000525459 HCRTR2O43614 444 aa17.05■□□□□ 0.32
PTPRK-218ENST00000525459 IFNA14P01570 189 aa17.05■□□□□ 0.32
PTPRK-218ENST00000525459 GDF1P27539 372 aa17.05■□□□□ 0.32
PTPRK-218ENST00000525459 PRKAR1BP31321 381 aa17.05■□□□□ 0.32
PTPRK-218ENST00000525459 GSK3BP49841 420 aa17.05■□□□□ 0.32
PTPRK-218ENST00000525459 P2RX1P51575 399 aa17.05■□□□□ 0.32
PTPRK-218ENST00000525459 INPP5JQ15735 1006 aaPredicted RBP17.05■□□□□ 0.32
PTPRK-218ENST00000525459 MAPK14Q16539 360 aa17.05■□□□□ 0.32
PTPRK-218ENST00000525459 ZNF440Q8IYI8 595 aa17.05■□□□□ 0.32
PTPRK-218ENST00000525459 CISD2Q8N5K1 135 aaKnown RBP17.05■□□□□ 0.32
PTPRK-218ENST00000525459 TMEM251Q8N6I4 163 aa17.05■□□□□ 0.32
PTPRK-218ENST00000525459 B4GALNT2Q8NHY0 566 aa17.05■□□□□ 0.32
PTPRK-218ENST00000525459 FBXO27Q8NI29 283 aa17.05■□□□□ 0.32
PTPRK-218ENST00000525459 BARD1Q99728 777 aaKnown RBP17.05■□□□□ 0.32
PTPRK-218ENST00000525459 QRSL1Q9H0R6 528 aaKnown RBP17.05■□□□□ 0.32
PTPRK-218ENST00000525459 PIF1Q9H611 641 aa17.05■□□□□ 0.32
PTPRK-218ENST00000525459 PCNX3Q9H6A9 2034 aa17.05■□□□□ 0.32
PTPRK-218ENST00000525459 HTR1EP28566 365 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 SRD5A2P31213 254 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 DSCR4P56555 118 aaPredicted RBP17.04■□□□□ 0.32
PTPRK-218ENST00000525459 KRTCAP3Q53RY4 240 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 ZNF311Q5JNZ3 666 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 ZNF324BQ6AW86 544 aaPredicted RBP17.04■□□□□ 0.32
PTPRK-218ENST00000525459 ARMC8Q8IUR7 673 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 GRAMD2AQ8IUY3 354 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 GATSQ8NAP1 163 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 OR2M3Q8NG83 312 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 CPT1CQ8TCG5 803 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 SLX1AQ9BQ83 275 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 RTN4RQ9BZR6 473 aa17.04■□□□□ 0.32
PTPRK-218ENST00000525459 LAT2Q9GZY6 243 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms