RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 GJC3Q8NFK1 279 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 KCTD4Q8WVF5 259 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 STARD4Q96DR4 205 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 CMTM3Q96MX0 182 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 NTN4Q9HB63 628 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 IL26Q9NPH9 171 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 DNAJC11Q9NVH1 559 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 NECAP2Q9NVZ3 263 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 AIPL1Q9NZN9 384 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 ARMCX3Q9UH62 379 aaPredicted RBP6.06□□□□□ -1.44
NEDD8-203ENST00000524927 BOKQ9UMX3 212 aaPredicted RBP6.06□□□□□ -1.44
NEDD8-203ENST00000524927 AAR2Q9Y312 384 aaKnown RBP6.06□□□□□ -1.44
NEDD8-203ENST00000524927 ATG4BQ9Y4P1 393 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 A0A1B0GUS0 222 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 SAGE2PA6NJ88 616 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 H7C417 338 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 TSPAN9O75954 239 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 OR6B1O95007 311 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 AP2A1O95782 977 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 BCL10O95999 233 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 SLC4A1P02730 911 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 P04436 131 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 CDH2P19022 906 aaPredicted RBP6.05□□□□□ -1.44
NEDD8-203ENST00000524927 UGT1A6P19224 532 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 PRTN3P24158 256 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 PDHA2P29803 388 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 PKLRP30613 574 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 PRLHRP49683 370 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 CDH12P55289 794 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 PLOD1Q02809 727 aaPredicted RBP6.05□□□□□ -1.44
NEDD8-203ENST00000524927 CSTF3Q12996 717 aaKnown RBP6.05□□□□□ -1.44
NEDD8-203ENST00000524927 ITGA9Q13797 1035 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 FGFBP1Q14512 234 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 IQCCQ4KMZ1 466 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 SCYL2Q6P3W7 929 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 TMEM154Q6P9G4 183 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 DENND6AQ8IWF6 608 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 CSNK1A1LQ8N752 337 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 NFAM1Q8NET5 270 aaPredicted RBP6.05□□□□□ -1.44
NEDD8-203ENST00000524927 OR51Q1Q8NH59 317 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 OR5K2Q8NHB8 316 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 ARRDC2Q8TBH0 407 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 NTN5Q8WTR8 489 aaPredicted RBP6.05□□□□□ -1.44
NEDD8-203ENST00000524927 SYN2Q92777 582 aaPredicted RBP6.05□□□□□ -1.44
NEDD8-203ENST00000524927 NEUROG1Q92886 237 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 PGM2Q96G03 612 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 FAM81BQ96LP2 452 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 UGT1A10Q9HAW8 530 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 UBE2TQ9NPD8 197 aaPredicted RBP6.05□□□□□ -1.44
NEDD8-203ENST00000524927 AMACRQ9UHK6 382 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 FBXW2Q9UKT8 454 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 ASF1AQ9Y294 204 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 TDRKHQ9Y2W6 561 aaKnown RBP6.05□□□□□ -1.44
NEDD8-203ENST00000524927 ADAM18Q9Y3Q7 739 aa6.05□□□□□ -1.44
NEDD8-203ENST00000524927 LSM4Q9Y4Z0 139 aaKnown RBP6.05□□□□□ -1.44
NEDD8-203ENST00000524927 DNAH9Q9NYC9 4486 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 MED12LQ86YW9 2145 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 TRBV11-1A0A0K0K1C0 115 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 hCG_1807616A0A1W2PRN6 198 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 ZNF814B7Z6K7 855 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 H0YGG7 62 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 TXNDC9O14530 226 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 AHCYL1O43865 530 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 IPO7O95373 1038 aaKnown RBP6.04□□□□□ -1.44
NEDD8-203ENST00000524927 MDKP21741 143 aaPredicted RBP6.04□□□□□ -1.44
NEDD8-203ENST00000524927 IL10P22301 178 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 HMGCLP35914 325 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 SLC39A14Q15043 492 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 HKDC1Q2TB90 917 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 ZNF658BQ4V348 819 aaPredicted RBP6.04□□□□□ -1.44
NEDD8-203ENST00000524927 C2CD6Q53TS8 623 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 NCMAPQ5T1S8 102 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 ERMARDQ5T6L9 678 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 C11orf71Q6IPW1 123 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 C16orf54Q6UWD8 224 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 LCTLQ6UWM7 567 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 KIAA1328Q86T90 577 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 BPIFB2Q8N4F0 458 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 ATPAF2Q8N5M1 289 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 LMNTD1Q8N9Z9 388 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 LINC01555Q8NAE3 123 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 APCDD1LQ8NCL9 501 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 MCOLN3Q8TDD5 553 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 TSLPQ969D9 159 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 OTULINQ96BN8 352 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 FAM120BQ96EK7 910 aaKnown RBP6.04□□□□□ -1.44
NEDD8-203ENST00000524927 SLC6A7Q99884 636 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 TRMOQ9BU70 441 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 UGT2B28Q9BY64 529 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 KLHL4Q9C0H6 718 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 OPN3Q9H1Y3 402 aaPredicted RBP6.04□□□□□ -1.44
NEDD8-203ENST00000524927 MAP6D1Q9H9H5 199 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 SMYD2Q9NRG4 433 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 DECR2Q9NUI1 292 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 CISD1Q9NZ45 108 aaKnown RBP6.04□□□□□ -1.44
NEDD8-203ENST00000524927 ADAM22Q9P0K1 906 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 DNAJC12Q9UKB3 198 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 PLAGL1Q9UM63 463 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 A3GALT2U3KPV4 340 aa6.04□□□□□ -1.44
NEDD8-203ENST00000524927 LOC390937A0A1W2PQ73 354 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms