RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 MATN1P21941 496 aa17.28■□□□□ 0.36
FBXO28-205ENST00000523990 CTSSP25774 331 aa17.28■□□□□ 0.36
FBXO28-205ENST00000523990 SSTR2P30874 369 aa17.28■□□□□ 0.36
FBXO28-205ENST00000523990 ASCL1P50553 236 aa17.28■□□□□ 0.36
FBXO28-205ENST00000523990 DGKQP52824 942 aa17.28■□□□□ 0.36
FBXO28-205ENST00000523990 DLX5P56178 289 aa17.28■□□□□ 0.36
FBXO28-205ENST00000523990 CLDN15P56746 228 aa17.28■□□□□ 0.36
FBXO28-205ENST00000523990 SLC9B1Q4ZJI4 515 aa17.28■□□□□ 0.36
FBXO28-205ENST00000523990 UBQLNLQ8IYU4 475 aa17.28■□□□□ 0.36
FBXO28-205ENST00000523990 VPS37AQ8NEZ2 397 aa17.28■□□□□ 0.36
FBXO28-205ENST00000523990 WNT2BQ93097 391 aa17.28■□□□□ 0.36
FBXO28-205ENST00000523990 SH3YL1Q96HL8 342 aaPredicted RBP17.28■□□□□ 0.36
FBXO28-205ENST00000523990 ZFP3Q96NJ6 502 aa17.28■□□□□ 0.36
FBXO28-205ENST00000523990 TM9SF2Q99805 663 aa17.28■□□□□ 0.36
FBXO28-205ENST00000523990 A0A087WZY1 265 aa17.27■□□□□ 0.35
FBXO28-205ENST00000523990 SHISA8B8ZZ34 492 aa17.27■□□□□ 0.35
FBXO28-205ENST00000523990 C9JVG2 144 aa17.27■□□□□ 0.35
FBXO28-205ENST00000523990 NPIPB9F8W1W9 429 aa17.27■□□□□ 0.35
FBXO28-205ENST00000523990 RCBTB2O95199 551 aa17.27■□□□□ 0.35
FBXO28-205ENST00000523990 CPSF4O95639 269 aaKnown RBP17.27■□□□□ 0.35
FBXO28-205ENST00000523990 IL18BPO95998 194 aa17.27■□□□□ 0.35
FBXO28-205ENST00000523990 TMIGD3P0DMS9 266 aaPredicted RBP17.27■□□□□ 0.35
FBXO28-205ENST00000523990 IL12AP29459 219 aa17.27■□□□□ 0.35
FBXO28-205ENST00000523990 FBXL19-AS1Q494R0 122 aa17.27■□□□□ 0.35
FBXO28-205ENST00000523990 FLYWCH1Q4VC44 716 aa17.27■□□□□ 0.35
FBXO28-205ENST00000523990 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.27■□□□□ 0.35
FBXO28-205ENST00000523990 ZNF527Q8NB42 609 aa17.27■□□□□ 0.35
FBXO28-205ENST00000523990 CHDHQ8NE62 594 aaPredicted RBP17.27■□□□□ 0.35
FBXO28-205ENST00000523990 MIPOL1Q8TD10 442 aa17.27■□□□□ 0.35
FBXO28-205ENST00000523990 ACTRT2Q8TDY3 377 aa17.27■□□□□ 0.35
FBXO28-205ENST00000523990 CCDC115Q96NT0 180 aa17.27■□□□□ 0.35
FBXO28-205ENST00000523990 SDF2Q99470 211 aa17.27■□□□□ 0.35
FBXO28-205ENST00000523990 KLHDC3Q9BQ90 382 aa17.27■□□□□ 0.35
FBXO28-205ENST00000523990 HOXD1Q9GZZ0 328 aa17.27■□□□□ 0.35
FBXO28-205ENST00000523990 CREBBPQ92793 2442 aa17.26■□□□□ 0.35
FBXO28-205ENST00000523990 DUXAA6NLW8 204 aa17.26■□□□□ 0.35
FBXO28-205ENST00000523990 H0YC42 278 aa17.26■□□□□ 0.35
FBXO28-205ENST00000523990 SEC14L5O43304 696 aa17.26■□□□□ 0.35
FBXO28-205ENST00000523990 TGM6O95932 706 aa17.26■□□□□ 0.35
FBXO28-205ENST00000523990 H2AFXP16104 143 aaPredicted RBP17.26■□□□□ 0.35
FBXO28-205ENST00000523990 UQCRC2P22695 453 aa17.26■□□□□ 0.35
FBXO28-205ENST00000523990 S100A3P33764 101 aa17.26■□□□□ 0.35
FBXO28-205ENST00000523990 OPRM1P35372 400 aa17.26■□□□□ 0.35
FBXO28-205ENST00000523990 SUCLG1P53597 346 aaKnown RBP17.26■□□□□ 0.35
FBXO28-205ENST00000523990 TPD52P55327 224 aaPredicted RBP17.26■□□□□ 0.35
FBXO28-205ENST00000523990 CLDN20P56880 219 aa17.26■□□□□ 0.35
FBXO28-205ENST00000523990 ZNF117Q03924 483 aa17.26■□□□□ 0.35
FBXO28-205ENST00000523990 FOXF2Q12947 444 aa17.26■□□□□ 0.35
FBXO28-205ENST00000523990 PLPPR5Q32ZL2 321 aa17.26■□□□□ 0.35
FBXO28-205ENST00000523990 KLHL26Q53HC5 615 aa17.26■□□□□ 0.35
FBXO28-205ENST00000523990 SAXO2Q658L1 398 aa17.26■□□□□ 0.35
FBXO28-205ENST00000523990 NXNQ6DKJ4 435 aa17.26■□□□□ 0.35
FBXO28-205ENST00000523990 MTERF4Q7Z6M4 381 aaKnown RBP17.26■□□□□ 0.35
FBXO28-205ENST00000523990 GRAMD2AQ8IUY3 354 aa17.26■□□□□ 0.35
FBXO28-205ENST00000523990 MEIOBQ8N635 442 aa17.26■□□□□ 0.35
FBXO28-205ENST00000523990 PHOSPHO1Q8TCT1 267 aa17.26■□□□□ 0.35
FBXO28-205ENST00000523990 ZBTB8AQ96BR9 441 aa17.26■□□□□ 0.35
FBXO28-205ENST00000523990 NPAS1Q99742 590 aa17.26■□□□□ 0.35
FBXO28-205ENST00000523990 BTNL2Q9UIR0 455 aa17.26■□□□□ 0.35
FBXO28-205ENST00000523990 L3MBTL1Q9Y468 752 aa17.26■□□□□ 0.35
FBXO28-205ENST00000523990 AP4B1Q9Y6B7 739 aa17.26■□□□□ 0.35
FBXO28-205ENST00000523990 C7orf72A4D263 438 aa17.25■□□□□ 0.35
FBXO28-205ENST00000523990 SYT5O00445 386 aa17.25■□□□□ 0.35
FBXO28-205ENST00000523990 AK1P00568 194 aa17.25■□□□□ 0.35
FBXO28-205ENST00000523990 PGRP06401 933 aa17.25■□□□□ 0.35
FBXO28-205ENST00000523990 IDO1P14902 403 aa17.25■□□□□ 0.35
FBXO28-205ENST00000523990 AGFG1P52594 562 aaKnown RBP17.25■□□□□ 0.35
FBXO28-205ENST00000523990 ATP12AP54707 1039 aa17.25■□□□□ 0.35
FBXO28-205ENST00000523990 CASP9P55211 416 aa17.25■□□□□ 0.35
FBXO28-205ENST00000523990 TLE4Q04727 773 aa17.25■□□□□ 0.35
FBXO28-205ENST00000523990 PDCD4Q53EL6 469 aaKnown RBP17.25■□□□□ 0.35
FBXO28-205ENST00000523990 HEPHL1Q6MZM0 1159 aa17.25■□□□□ 0.35
FBXO28-205ENST00000523990 HDXQ7Z353 690 aa17.25■□□□□ 0.35
FBXO28-205ENST00000523990 GGNQ86UU5 652 aa17.25■□□□□ 0.35
FBXO28-205ENST00000523990 GCNT2Q8N0V5 402 aa17.25■□□□□ 0.35
FBXO28-205ENST00000523990 GTPBP8Q8N3Z3 284 aaPredicted RBP17.25■□□□□ 0.35
FBXO28-205ENST00000523990 B4GALNT2Q8NHY0 566 aa17.25■□□□□ 0.35
FBXO28-205ENST00000523990 SMPDL3BQ92485 455 aa17.25■□□□□ 0.35
FBXO28-205ENST00000523990 NEURL3Q96EH8 262 aa17.25■□□□□ 0.35
FBXO28-205ENST00000523990 MARK4Q96L34 752 aa17.25■□□□□ 0.35
FBXO28-205ENST00000523990 LURAP1Q96LR2 239 aa17.25■□□□□ 0.35
FBXO28-205ENST00000523990 C7orf26Q96N11 449 aa17.25■□□□□ 0.35
FBXO28-205ENST00000523990 OR52B2Q96RD2 323 aa17.25■□□□□ 0.35
FBXO28-205ENST00000523990 SFXN3Q9BWM7 321 aa17.25■□□□□ 0.35
FBXO28-205ENST00000523990 OR51I1Q9H343 314 aa17.25■□□□□ 0.35
FBXO28-205ENST00000523990 MED17Q9NVC6 651 aa17.25■□□□□ 0.35
FBXO28-205ENST00000523990 ARGLU1Q9NWB6 273 aaPredicted RBP17.25■□□□□ 0.35
FBXO28-205ENST00000523990 JKAMPQ9P055 326 aa17.25■□□□□ 0.35
FBXO28-205ENST00000523990 KCNN3Q9UGI6 736 aa17.25■□□□□ 0.35
FBXO28-205ENST00000523990 PSMA4P25789 261 aaKnown RBP17.24■□□□□ 0.35
FBXO28-205ENST00000523990 RNF144AP50876 292 aaPredicted RBP17.24■□□□□ 0.35
FBXO28-205ENST00000523990 ZNF41P51814 821 aaPredicted RBP17.24■□□□□ 0.35
FBXO28-205ENST00000523990 EEFSECP57772 596 aaKnown RBP17.24■□□□□ 0.35
FBXO28-205ENST00000523990 ARHGAP11BQ3KRB8 267 aa17.24■□□□□ 0.35
FBXO28-205ENST00000523990 CBLN3Q6UW01 205 aa17.24■□□□□ 0.35
FBXO28-205ENST00000523990 METTL25Q8N6Q8 603 aa17.24■□□□□ 0.35
FBXO28-205ENST00000523990 GLB1L3Q8NCI6 653 aaPredicted RBP17.24■□□□□ 0.35
FBXO28-205ENST00000523990 RNASE6Q93091 150 aaKnown RBP17.24■□□□□ 0.35
FBXO28-205ENST00000523990 INTS12Q96CB8 462 aaKnown RBP17.24■□□□□ 0.35
FBXO28-205ENST00000523990 SLC35A5Q9BS91 424 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms