RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 TAS2R39P59534 338 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 HERVK_113P63132 956 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 ERVK-8P63133 956 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 CDKL1Q00532 357 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 PLIN5Q00G26 463 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 IRF8Q02556 426 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 SRYQ05066 204 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 KLF10Q13118 480 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 CHIT1Q13231 466 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 DDX39BQ13838 428 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 DOC2AQ14183 400 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 DAZAP2Q15038 168 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 TGFBIQ15582 683 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 PDK4Q16654 411 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 HIST2H2ACQ16777 129 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 ADPRMQ3LIE5 342 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 EIPR1Q53HC9 387 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 C18orf63Q68DL7 685 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 HIST2H2AA3Q6FI13 130 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 SLC29A4Q7RTT9 530 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 GALNT7Q86SF2 657 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 LUZP2Q86TE4 346 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 GPSM1Q86YR5 675 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 LACC1Q8IV20 430 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 P3H2Q8IVL5 708 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 PRR22Q8IZ63 422 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 TAGAPQ8N103 731 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 PDIK1LQ8N165 341 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 LRRC25Q8N386 305 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 RASGEF1CQ8N431 466 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 RNF175Q8N4F7 328 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 NUBPLQ8TB37 319 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 PAQR8Q8TEZ7 354 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 WDR60Q8WVS4 1066 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 VPS39Q96JC1 886 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 ART5Q96L15 291 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 ZNF597Q96LX8 424 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 NAP1L3Q99457 506 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 TIMP4Q99727 224 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 TMEM79Q9BSE2 394 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 NAT9Q9BTE0 207 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 TBCDQ9BTW9 1192 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 RBM24Q9BX46 236 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 ERVK-6Q9BXR3 956 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 CAPS2Q9BXY5 557 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 ROGDIQ9GZN7 287 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 OR51B5Q9H339 312 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 RPF2Q9H7B2 306 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 NT5DC2Q9H857 520 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 PLEKHF2Q9H8W4 249 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 CNOT10Q9H9A5 744 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 CAB39LQ9H9S4 337 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 PLAC1Q9HBJ0 212 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 PROK2Q9HC23 129 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 LYRM4Q9HD34 91 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 SH2D2AQ9NP31 389 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 ACKR4Q9NPB9 350 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 CNIH4Q9P003 139 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 ZNF629Q9UEG4 869 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 ZNF490Q9ULM2 529 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 CORO1CQ9ULV4 474 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 ERVK-19Q9WJR5 959 aa4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 CHCHD2Q9Y6H1 151 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 PHF3Q92576 2039 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-239ENST00000523685 JMJD1CQ15652 2540 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 WASHC1A8K0Z3 465 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 H7C1Q1 480 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 TP53I11O14683 189 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 MGST3O14880 152 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 CASKO14936 926 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 ARHGEF9O43307 516 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 TRIM3O75382 744 aaPredicted RBP4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 STK16O75716 305 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 C1QAP02745 245 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 IGKV3-11P04433 115 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 HEXAP06865 529 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 CCDC166P0CW27 439 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 TMIGD3P0DMS9 266 aaPredicted RBP4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 CD53P19397 219 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 HIST1H1TP22492 207 aaPredicted RBP4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 TLX1P31314 330 aaPredicted RBP4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 OPRM1P35372 400 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 TIMP3P35625 211 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 CPOXP36551 454 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 GSTM5P46439 218 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 FNTAP49354 379 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 PSG6Q00889 435 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 CRYZQ08257 329 aaKnown RBP4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 TBL3Q12788 808 aaKnown RBP4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 SLAMF1Q13291 335 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 RCAN2Q14206 197 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 SF3B4Q15427 424 aaKnown RBP eCLIP4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 PAGE2BQ5JRK9 111 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 Q5PR19 223 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 DCST1Q5T197 706 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 ATPAF1Q5TC12 328 aaPredicted RBP4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 NSUN5P2Q63ZY6 315 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 OR4C11Q6IEV9 310 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 SULT1C3Q6IMI6 304 aa4.76□□□□□ -1.65
CTNNA1-239ENST00000523685 GRHL2Q6ISB3 625 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms