RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 ACTRT2Q8TDY3 377 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 JADE3Q92613 823 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 PPP1R36Q96LQ0 422 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 PRPF18Q99633 342 aaKnown RBP11.13□□□□□ -0.63
VEGFA-223ENST00000523125 DUSP26Q9BV47 211 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 BHLHE41Q9C0J9 482 aaPredicted RBP11.13□□□□□ -0.63
VEGFA-223ENST00000523125 AKTIPQ9H8T0 292 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 NOP53Q9NZM5 478 aaKnown RBP11.13□□□□□ -0.63
VEGFA-223ENST00000523125 ST6GALNAC2Q9UJ37 374 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 HAO1Q9UJM8 370 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 EIF3LQ9Y262 564 aaKnown RBP11.13□□□□□ -0.63
VEGFA-223ENST00000523125 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.13□□□□□ -0.63
VEGFA-223ENST00000523125 RAP2CQ9Y3L5 183 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 ZNF175Q9Y473 711 aa11.13□□□□□ -0.63
VEGFA-223ENST00000523125 FREM1Q5H8C1 2179 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 A0A087WZY1 265 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 NPIPB9F8W1W9 429 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 OIP5O43482 229 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 AQP8O94778 261 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 BGNP21810 368 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 CPA2P48052 419 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 SLC1A6P48664 564 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 PCYT1AP49585 367 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 ART1P52961 327 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 FAM27E3Q08E93 113 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 MAD2L1Q13257 205 aaPredicted RBP11.12□□□□□ -0.63
VEGFA-223ENST00000523125 TP53BP2Q13625 1128 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 CTU2Q2VPK5 515 aaKnown RBP11.12□□□□□ -0.63
VEGFA-223ENST00000523125 PGS1Q32NB8 556 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 KLHL26Q53HC5 615 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 CEP85LQ5SZL2 805 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.12□□□□□ -0.631e-7■□□□□ 10.9
VEGFA-223ENST00000523125 ZNF474Q6S9Z5 364 aaPredicted RBP11.12□□□□□ -0.63
VEGFA-223ENST00000523125 CLECL1Q8IZS7 167 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 OR56A1Q8NGH5 318 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 OR5AK3PQ8NH89 298 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 POC1BQ8TC44 478 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 SMPDL3BQ92485 455 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 NINJ1Q92982 152 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 PGM2Q96G03 612 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 SH3YL1Q96HL8 342 aaPredicted RBP11.12□□□□□ -0.63
VEGFA-223ENST00000523125 ADGRG7Q96K78 797 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 CXXC4Q9H2H0 198 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 SERHL2Q9H4I8 314 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 HHATLQ9HCP6 504 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 CCM2LQ9NUG4 571 aaPredicted RBP11.12□□□□□ -0.63
VEGFA-223ENST00000523125 MED17Q9NVC6 651 aa11.12□□□□□ -0.63
VEGFA-223ENST00000523125 ZNF469Q96JG9 3925 aaPredicted RBP11.12□□□□□ -0.63
VEGFA-223ENST00000523125 NPIPA5A0A0B4J1W7 369 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 A0A1W2PPR1 153 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 SH3D21A4FU49 640 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 NPIPA7E9PJI5 369 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 SCDO00767 359 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 ANKRD28O15084 1053 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 CFLARO15519 480 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 EFNA2O43921 213 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 SCN2BO60939 215 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 SMNDC1O75940 238 aaKnown RBP eCLIP11.11□□□□□ -0.634e-7■■□□□ 12.8
VEGFA-223ENST00000523125 LINGO3P0C6S8 592 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 MYZAPP0CAP1 466 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 NPIPA8P0DM63 369 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 HPGDP15428 266 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 CD1EP15812 388 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 IL11P20809 199 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 SLC6A8P48029 635 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 RPL14P50914 215 aaKnown RBP11.11□□□□□ -0.63
VEGFA-223ENST00000523125 PHC1P78364 1004 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 ZNF117Q03924 483 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 DCST2Q5T1A1 773 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 OR4F3Q6IEY1 312 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 CBLN3Q6UW01 205 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 MISPQ8IVT2 679 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 CNEP1R1Q8N9A8 125 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 B4GALNT2Q8NHY0 566 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 ADAMTS15Q8TE58 950 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 ZBTB8AQ96BR9 441 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 MOAP1Q96BY2 351 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 ZNF524Q96C55 264 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 CHMP6Q96FZ7 201 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 RNF145Q96MT1 663 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 DACH2Q96NX9 599 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 OR7D2Q96RA2 312 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 OPN3Q9H1Y3 402 aaPredicted RBP11.11□□□□□ -0.63
VEGFA-223ENST00000523125 CENPHQ9H3R5 247 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 PLEKHF2Q9H8W4 249 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 NEUROD4Q9HD90 331 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 ICAM5Q9UMF0 924 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 FAF1Q9UNN5 650 aaPredicted RBP11.11□□□□□ -0.63
VEGFA-223ENST00000523125 TESMINQ9Y4I5 508 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 ACTL7BQ9Y614 415 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 VPS13CQ709C8 3753 aa11.11□□□□□ -0.63
VEGFA-223ENST00000523125 PRR14LQ5THK1 2151 aa11.1□□□□□ -0.63
VEGFA-223ENST00000523125 RAI1Q7Z5J4 1906 aaPredicted RBP11.1□□□□□ -0.63
VEGFA-223ENST00000523125 A0A0J9YW62 118 aa11.1□□□□□ -0.63
VEGFA-223ENST00000523125 RNASET2O00584 256 aaKnown RBP11.1□□□□□ -0.63
VEGFA-223ENST00000523125 EIF1AYO14602 144 aaKnown RBP11.1□□□□□ -0.63
VEGFA-223ENST00000523125 ADAMDEC1O15204 470 aa11.1□□□□□ -0.63
VEGFA-223ENST00000523125 SOX30O94993 753 aa11.1□□□□□ -0.63
VEGFA-223ENST00000523125 SNUPNO95149 360 aaKnown RBP11.1□□□□□ -0.63
VEGFA-223ENST00000523125 OPN1LWP04000 364 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms