RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 RBBP8Q99708 897 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 CMKLR1Q99788 373 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 APOL4Q9BPW4 351 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 ANKRD60Q9BZ19 345 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 NRSN2Q9GZP1 204 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 SMG9Q9H0W8 520 aaKnown RBP7.05□□□□□ -1.28
HDAC3-216ENST00000523088 DCSTAMPQ9H295 470 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 FN3KRPQ9HA64 309 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 TPT1P8Q9HAU6 139 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 FAM118AQ9NWS6 357 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 DLL3Q9NYJ7 618 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 UBP1Q9NZI7 540 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 EBF1Q9UH73 591 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 ZNF639Q9UID6 485 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 ANAPC7Q9UJX3 599 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 LSM7Q9UK45 103 aaKnown RBP7.05□□□□□ -1.28
HDAC3-216ENST00000523088 USP22Q9UPT9 525 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 PEX16Q9Y5Y5 336 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 FRYLO94915 3013 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 DMXL1Q9Y485 3027 aa7.05□□□□□ -1.28
HDAC3-216ENST00000523088 A0A1B0GTH6 734 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 A0A1W2PQ09 198 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 C2orf78A6NCI8 922 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 CDRT15L2A8MXV6 281 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 K7EQM0 130 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 M0QYT0 321 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 ADAM10O14672 748 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 TP53I11O14683 189 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 SELENOFO60613 162 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 MMP20O60882 483 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 KCNK2O95069 426 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 WNT11O96014 354 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 APODP05090 189 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 TSPAN19P0C672 248 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 GTF2F2P13984 249 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 ARSAP15289 507 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 HIST1H1BP16401 226 aaKnown RBP7.04□□□□□ -1.28
HDAC3-216ENST00000523088 HLA-DMAP28067 261 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 CSNK1EP49674 416 aaKnown RBP7.04□□□□□ -1.28
HDAC3-216ENST00000523088 COMPP49747 757 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-216ENST00000523088 XKP51811 444 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 AQP4P55087 323 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 PER3P56645 1201 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 KLF3P57682 345 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-216ENST00000523088 VSX2P58304 361 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-216ENST00000523088 RAB11AP62491 216 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 FKBP3Q00688 224 aaKnown RBP7.04□□□□□ -1.28
HDAC3-216ENST00000523088 B4GALNT1Q00973 533 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 IL5RAQ01344 420 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 MYL5Q02045 173 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 EMX2Q04743 252 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 ZNF155Q12901 538 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-216ENST00000523088 RAB11BQ15907 218 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 CSRP2Q16527 193 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 VASNQ6EMK4 673 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 FBXL19Q6PCT2 694 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 TEX261Q6UWH6 196 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 BAIAP2L2Q6UXY1 529 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 GCNT7Q6ZNI0 430 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 Q6ZS52 159 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 FRMD7Q6ZUT3 714 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 SLC46A3Q7Z3Q1 461 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 GRINAQ7Z429 371 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 HSD17B13Q7Z5P4 300 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-216ENST00000523088 COMMD2Q86X83 199 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 RHOT1Q8IXI2 618 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 ZNF276Q8N554 614 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 RASGEF1AQ8N9B8 481 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 FBXL13Q8NEE6 735 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 OR10H4Q8NGA5 316 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 OR4M1Q8NGD0 313 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 DCAKDQ8WVC6 231 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 ASB5Q8WWX0 329 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 THAP4Q8WY91 577 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 FKBP10Q96AY3 582 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 TM4SF18Q96CE8 201 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 CCDC124Q96CT7 223 aaKnown RBP7.04□□□□□ -1.28
HDAC3-216ENST00000523088 C1GALT1C1Q96EU7 318 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 SAT2Q96F10 170 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-216ENST00000523088 HYLS1Q96M11 299 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 MCCC1Q96RQ3 725 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-216ENST00000523088 ZNF607Q96SK3 696 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 STACQ99469 402 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 FMO2Q99518 471 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 ELF4Q99607 663 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-216ENST00000523088 SLC35A5Q9BS91 424 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 ROPN1BQ9BZX4 212 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-216ENST00000523088 REEP4Q9H6H4 257 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 ROPN1Q9HAT0 212 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-216ENST00000523088 ABCB9Q9NP78 766 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 SAYSD1Q9NPB0 183 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 FAM49BQ9NUQ9 324 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 DDIT4Q9NX09 232 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 USE1Q9NZ43 259 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 ARHGAP20Q9P2F6 1191 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 GULP1Q9UBP9 304 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 B4GALT6Q9UBX8 382 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 ZNF282Q9UDV7 671 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-216ENST00000523088 SEC14L4Q9UDX3 406 aa7.04□□□□□ -1.28
HDAC3-216ENST00000523088 OR12D3Q9UGF7 316 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms