RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 GGNQ86UU5 652 aa16.82■□□□□ 0.28
SPIDR-220ENST00000522900 ANKRD42Q8N9B4 389 aa16.82■□□□□ 0.28
SPIDR-220ENST00000522900 FNDC9Q8TBE3 224 aa16.82■□□□□ 0.28
SPIDR-220ENST00000522900 ADAMTS15Q8TE58 950 aa16.82■□□□□ 0.28
SPIDR-220ENST00000522900 CLEC4MQ9H2X3 399 aaPredicted RBP16.82■□□□□ 0.28
SPIDR-220ENST00000522900 ACBD3Q9H3P7 528 aa16.82■□□□□ 0.28
SPIDR-220ENST00000522900 PIGMQ9H3S5 423 aa16.82■□□□□ 0.28
SPIDR-220ENST00000522900 MED17Q9NVC6 651 aa16.82■□□□□ 0.28
SPIDR-220ENST00000522900 HAO1Q9UJM8 370 aa16.82■□□□□ 0.28
SPIDR-220ENST00000522900 FAF1Q9UNN5 650 aaPredicted RBP16.82■□□□□ 0.28
SPIDR-220ENST00000522900 A0A1W2PQD3 144 aa16.81■□□□□ 0.28
SPIDR-220ENST00000522900 SCDO00767 359 aa16.81■□□□□ 0.28
SPIDR-220ENST00000522900 PSMA4P25789 261 aaKnown RBP16.81■□□□□ 0.28
SPIDR-220ENST00000522900 CPA2P48052 419 aa16.81■□□□□ 0.28
SPIDR-220ENST00000522900 WDR4P57081 412 aaKnown RBP16.81■□□□□ 0.28
SPIDR-220ENST00000522900 SIRPAP78324 504 aa16.81■□□□□ 0.28
SPIDR-220ENST00000522900 PHC1P78364 1004 aa16.81■□□□□ 0.28
SPIDR-220ENST00000522900 SORDQ00796 357 aa16.81■□□□□ 0.28
SPIDR-220ENST00000522900 BST1Q10588 318 aa16.81■□□□□ 0.28
SPIDR-220ENST00000522900 PLPPR5Q32ZL2 321 aa16.81■□□□□ 0.28
SPIDR-220ENST00000522900 KLHL26Q53HC5 615 aa16.81■□□□□ 0.28
SPIDR-220ENST00000522900 DCST2Q5T1A1 773 aa16.81■□□□□ 0.28
SPIDR-220ENST00000522900 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.81■□□□□ 0.28
SPIDR-220ENST00000522900 CDC20BQ86Y33 519 aa16.81■□□□□ 0.28
SPIDR-220ENST00000522900 METTL25Q8N6Q8 603 aa16.81■□□□□ 0.28
SPIDR-220ENST00000522900 CNEP1R1Q8N9A8 125 aa16.81■□□□□ 0.28
SPIDR-220ENST00000522900 OR5D16Q8NGK9 328 aa16.81■□□□□ 0.28
SPIDR-220ENST00000522900 POC1BQ8TC44 478 aa16.81■□□□□ 0.28
SPIDR-220ENST00000522900 SFXN5Q8TD22 340 aa16.81■□□□□ 0.28
SPIDR-220ENST00000522900 OR7D2Q96RA2 312 aa16.81■□□□□ 0.28
SPIDR-220ENST00000522900 NUF2Q9BZD4 464 aa16.81■□□□□ 0.28
SPIDR-220ENST00000522900 SERHL2Q9H4I8 314 aa16.81■□□□□ 0.28
SPIDR-220ENST00000522900 PACSIN3Q9UKS6 424 aa16.81■□□□□ 0.28
SPIDR-220ENST00000522900 A0A087WZY1 265 aa16.8■□□□□ 0.28
SPIDR-220ENST00000522900 SMNDC1O75940 238 aaKnown RBP eCLIP16.8■□□□□ 0.28
SPIDR-220ENST00000522900 AQP8O94778 261 aa16.8■□□□□ 0.28
SPIDR-220ENST00000522900 TUBBP07437 444 aa16.8■□□□□ 0.28
SPIDR-220ENST00000522900 IL11P20809 199 aa16.8■□□□□ 0.28
SPIDR-220ENST00000522900 SOAT1P35610 550 aa16.8■□□□□ 0.28
SPIDR-220ENST00000522900 SLC6A8P48029 635 aa16.8■□□□□ 0.28
SPIDR-220ENST00000522900 IST1P53990 364 aa16.8■□□□□ 0.28
SPIDR-220ENST00000522900 CASP9P55211 416 aa16.8■□□□□ 0.28
SPIDR-220ENST00000522900 EEF1A1P68104 462 aaKnown RBP16.8■□□□□ 0.28
SPIDR-220ENST00000522900 FAM27E3Q08E93 113 aa16.8■□□□□ 0.28
SPIDR-220ENST00000522900 NDUFAF6Q330K2 333 aa16.8■□□□□ 0.28
SPIDR-220ENST00000522900 EEF1A1P5Q5VTE0 462 aa16.8■□□□□ 0.28
SPIDR-220ENST00000522900 OR2A2Q6IF42 318 aa16.8■□□□□ 0.28
SPIDR-220ENST00000522900 CBLN3Q6UW01 205 aa16.8■□□□□ 0.28
SPIDR-220ENST00000522900 OLIG3Q7RTU3 272 aa16.8■□□□□ 0.28
SPIDR-220ENST00000522900 C6orf120Q7Z4R8 191 aa16.8■□□□□ 0.28
SPIDR-220ENST00000522900 GTPBP8Q8N3Z3 284 aaPredicted RBP16.8■□□□□ 0.28
SPIDR-220ENST00000522900 B4GALNT2Q8NHY0 566 aa16.8■□□□□ 0.28
SPIDR-220ENST00000522900 PHOSPHO1Q8TCT1 267 aa16.8■□□□□ 0.28
SPIDR-220ENST00000522900 ACTRT2Q8TDY3 377 aa16.8■□□□□ 0.28
SPIDR-220ENST00000522900 RNF145Q96MT1 663 aa16.8■□□□□ 0.28
SPIDR-220ENST00000522900 DPY30Q9C005 99 aa16.8■□□□□ 0.28
SPIDR-220ENST00000522900 OPN3Q9H1Y3 402 aaPredicted RBP16.8■□□□□ 0.28
SPIDR-220ENST00000522900 RNF122Q9H9V4 155 aa16.8■□□□□ 0.28
SPIDR-220ENST00000522900 NEUROD4Q9HD90 331 aa16.8■□□□□ 0.28
SPIDR-220ENST00000522900 CCDC168Q8NDH2 2452 aa16.79■□□□□ 0.28
SPIDR-220ENST00000522900 HRNRQ86YZ3 2850 aaPredicted RBP16.79■□□□□ 0.28
SPIDR-220ENST00000522900 EIF1AYO14602 144 aaKnown RBP16.79■□□□□ 0.28
SPIDR-220ENST00000522900 ANKRD28O15084 1053 aa16.79■□□□□ 0.28
SPIDR-220ENST00000522900 SCN2BO60939 215 aa16.79■□□□□ 0.28
SPIDR-220ENST00000522900 CGAP01215 116 aa16.79■□□□□ 0.28
SPIDR-220ENST00000522900 CRHP06850 196 aa16.79■□□□□ 0.28
SPIDR-220ENST00000522900 ZNF17P17021 662 aa16.79■□□□□ 0.28
SPIDR-220ENST00000522900 ATP6V1C1P21283 382 aa16.79■□□□□ 0.28
SPIDR-220ENST00000522900 EIF1AXP47813 144 aaKnown RBP16.79■□□□□ 0.28
SPIDR-220ENST00000522900 ZNF41P51814 821 aaPredicted RBP16.79■□□□□ 0.28
SPIDR-220ENST00000522900 ZNF117Q03924 483 aa16.79■□□□□ 0.28
SPIDR-220ENST00000522900 SGCBQ16585 318 aa16.79■□□□□ 0.28
SPIDR-220ENST00000522900 HHATQ5VTY9 493 aa16.79■□□□□ 0.28
SPIDR-220ENST00000522900 ZNF474Q6S9Z5 364 aaPredicted RBP16.79■□□□□ 0.28
SPIDR-220ENST00000522900 ANKRD46Q86W74 232 aa16.79■□□□□ 0.28
SPIDR-220ENST00000522900 MOAP1Q96BY2 351 aa16.79■□□□□ 0.28
SPIDR-220ENST00000522900 ZNF524Q96C55 264 aa16.79■□□□□ 0.28
SPIDR-220ENST00000522900 ADGRG7Q96K78 797 aa16.79■□□□□ 0.28
SPIDR-220ENST00000522900 TMEM185BQ9H7F4 350 aa16.79■□□□□ 0.28
SPIDR-220ENST00000522900 MEAF6Q9HAF1 191 aa16.79■□□□□ 0.28
SPIDR-220ENST00000522900 CARD8Q9Y2G2 431 aa16.79■□□□□ 0.28
SPIDR-220ENST00000522900 ZNF175Q9Y473 711 aa16.79■□□□□ 0.28
SPIDR-220ENST00000522900 C7orf72A4D263 438 aa16.78■□□□□ 0.28
SPIDR-220ENST00000522900 NPIPB9F8W1W9 429 aa16.78■□□□□ 0.28
SPIDR-220ENST00000522900 RNASET2O00584 256 aaKnown RBP16.78■□□□□ 0.28
SPIDR-220ENST00000522900 MSTNO14793 375 aa16.78■□□□□ 0.28
SPIDR-220ENST00000522900 EFNA2O43921 213 aa16.78■□□□□ 0.28
SPIDR-220ENST00000522900 SNUPNO95149 360 aaKnown RBP16.78■□□□□ 0.28
SPIDR-220ENST00000522900 KRT16P08779 473 aa16.78■□□□□ 0.28
SPIDR-220ENST00000522900 LINGO3P0C6S8 592 aa16.78■□□□□ 0.28
SPIDR-220ENST00000522900 LBPP18428 481 aa16.78■□□□□ 0.28
SPIDR-220ENST00000522900 MATN1P21941 496 aa16.78■□□□□ 0.28
SPIDR-220ENST00000522900 CPOXP36551 454 aa16.78■□□□□ 0.28
SPIDR-220ENST00000522900 ART1P52961 327 aa16.78■□□□□ 0.28
SPIDR-220ENST00000522900 ATP12AP54707 1039 aa16.78■□□□□ 0.28
SPIDR-220ENST00000522900 RPS3AP61247 264 aaKnown RBP16.78■□□□□ 0.28
SPIDR-220ENST00000522900 GUSBP1Q15486 140 aa16.78■□□□□ 0.28
SPIDR-220ENST00000522900 CTU2Q2VPK5 515 aaKnown RBP16.78■□□□□ 0.28
SPIDR-220ENST00000522900 CROCCP2Q86T23 111 aa16.78■□□□□ 0.28
SPIDR-220ENST00000522900 MISPQ8IVT2 679 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms