RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ZNF844Q08AG5 666 aa18.6■□□□□ 0.57
SDCBP-209ENST00000522243 CHI3L2Q15782 390 aa18.6■□□□□ 0.57
SDCBP-209ENST00000522243 PDCD2Q16342 344 aaPredicted RBP18.6■□□□□ 0.57
SDCBP-209ENST00000522243 PLPPR5Q32ZL2 321 aa18.6■□□□□ 0.57
SDCBP-209ENST00000522243 LSM12Q3MHD2 195 aaKnown RBP18.6■□□□□ 0.57
SDCBP-209ENST00000522243 PAMR1Q6UXH9 720 aa18.6■□□□□ 0.57
SDCBP-209ENST00000522243 MREGQ8N565 214 aa18.6■□□□□ 0.57
SDCBP-209ENST00000522243 ZNF610Q8N9Z0 462 aa18.6■□□□□ 0.57
SDCBP-209ENST00000522243 OR5AK3PQ8NH89 298 aa18.6■□□□□ 0.57
SDCBP-209ENST00000522243 B4GALNT2Q8NHY0 566 aa18.6■□□□□ 0.57
SDCBP-209ENST00000522243 ADAMTS15Q8TE58 950 aa18.6■□□□□ 0.57
SDCBP-209ENST00000522243 RNF145Q96MT1 663 aa18.6■□□□□ 0.57
SDCBP-209ENST00000522243 DUSP26Q9BV47 211 aa18.6■□□□□ 0.57
SDCBP-209ENST00000522243 ACTRT3Q9BYD9 372 aa18.6■□□□□ 0.57
SDCBP-209ENST00000522243 PARD6BQ9BYG5 372 aa18.6■□□□□ 0.57
SDCBP-209ENST00000522243 PRRG4Q9BZD6 226 aa18.6■□□□□ 0.57
SDCBP-209ENST00000522243 TMEM185BQ9H7F4 350 aa18.6■□□□□ 0.57
SDCBP-209ENST00000522243 PLEKHF2Q9H8W4 249 aa18.6■□□□□ 0.57
SDCBP-209ENST00000522243 DUSP22Q9NRW4 184 aa18.6■□□□□ 0.57
SDCBP-209ENST00000522243 CLEC4AQ9UMR7 237 aa18.6■□□□□ 0.57
SDCBP-209ENST00000522243 EDARQ9UNE0 448 aa18.6■□□□□ 0.57
SDCBP-209ENST00000522243 FAF1Q9UNN5 650 aaPredicted RBP18.6■□□□□ 0.57
SDCBP-209ENST00000522243 ANKHD1Q8IWZ3 2542 aaKnown RBP18.59■□□□□ 0.57
SDCBP-209ENST00000522243 A0A087WZY1 265 aa18.59■□□□□ 0.57
SDCBP-209ENST00000522243 CGAP01215 116 aa18.59■□□□□ 0.57
SDCBP-209ENST00000522243 ZNF17P17021 662 aa18.59■□□□□ 0.57
SDCBP-209ENST00000522243 PRPS1L1P21108 318 aa18.59■□□□□ 0.57
SDCBP-209ENST00000522243 ATP6V1C1P21283 382 aa18.59■□□□□ 0.57
SDCBP-209ENST00000522243 LCN1P31025 176 aa18.59■□□□□ 0.57
SDCBP-209ENST00000522243 CD79BP40259 229 aa18.59■□□□□ 0.57
SDCBP-209ENST00000522243 PGS1Q32NB8 556 aa18.59■□□□□ 0.57
SDCBP-209ENST00000522243 WDR75Q8IWA0 830 aaKnown RBP18.59■□□□□ 0.57
SDCBP-209ENST00000522243 RIMKLAQ8IXN7 391 aa18.59■□□□□ 0.57
SDCBP-209ENST00000522243 ZNF781Q8N8C0 355 aa18.59■□□□□ 0.57
SDCBP-209ENST00000522243 OR56A1Q8NGH5 318 aa18.59■□□□□ 0.57
SDCBP-209ENST00000522243 OR10D3Q8NH80 312 aa18.59■□□□□ 0.57
SDCBP-209ENST00000522243 PSMA8Q8TAA3 256 aa18.59■□□□□ 0.57
SDCBP-209ENST00000522243 POC1BQ8TC44 478 aa18.59■□□□□ 0.57
SDCBP-209ENST00000522243 PHOSPHO1Q8TCT1 267 aa18.59■□□□□ 0.57
SDCBP-209ENST00000522243 WFIKKN1Q96NZ8 548 aa18.59■□□□□ 0.57
SDCBP-209ENST00000522243 PRPF18Q99633 342 aaKnown RBP18.59■□□□□ 0.57
SDCBP-209ENST00000522243 GPATCH2Q9NW75 528 aa18.59■□□□□ 0.57
SDCBP-209ENST00000522243 KLHL28Q9NXS3 571 aa18.59■□□□□ 0.57
SDCBP-209ENST00000522243 C6orf203Q9P0P8 240 aaPredicted RBP18.59■□□□□ 0.57
SDCBP-209ENST00000522243 TESMINQ9Y4I5 508 aa18.59■□□□□ 0.57
SDCBP-209ENST00000522243 A0A1W2PQD3 144 aa18.58■□□□□ 0.56
SDCBP-209ENST00000522243 OIP5O43482 229 aa18.58■□□□□ 0.56
SDCBP-209ENST00000522243 RAF1P04049 648 aa18.58■□□□□ 0.56
SDCBP-209ENST00000522243 POU2F1P14859 743 aa18.58■□□□□ 0.56
SDCBP-209ENST00000522243 PSMA4P25789 261 aaKnown RBP18.58■□□□□ 0.56
SDCBP-209ENST00000522243 SOAT1P35610 550 aa18.58■□□□□ 0.56
SDCBP-209ENST00000522243 KCNJ5P48544 419 aa18.58■□□□□ 0.56
SDCBP-209ENST00000522243 RIPPLY3P57055 190 aa18.58■□□□□ 0.56
SDCBP-209ENST00000522243 EMX2Q04743 252 aa18.58■□□□□ 0.56
SDCBP-209ENST00000522243 KEAP1Q14145 624 aa18.58■□□□□ 0.56
SDCBP-209ENST00000522243 DCST2Q5T1A1 773 aa18.58■□□□□ 0.56
SDCBP-209ENST00000522243 MISPQ8IVT2 679 aa18.58■□□□□ 0.56
SDCBP-209ENST00000522243 CLEC4FQ8N1N0 589 aa18.58■□□□□ 0.56
SDCBP-209ENST00000522243 GTPBP8Q8N3Z3 284 aaPredicted RBP18.58■□□□□ 0.56
SDCBP-209ENST00000522243 NATD1Q8N6N6 113 aa18.58■□□□□ 0.56
SDCBP-209ENST00000522243 ZBTB8AQ96BR9 441 aa18.58■□□□□ 0.56
SDCBP-209ENST00000522243 BHLHE41Q9C0J9 482 aaPredicted RBP18.58■□□□□ 0.56
SDCBP-209ENST00000522243 C20orf27Q9GZN8 174 aa18.58■□□□□ 0.56
SDCBP-209ENST00000522243 CENPHQ9H3R5 247 aa18.58■□□□□ 0.56
SDCBP-209ENST00000522243 HHATLQ9HCP6 504 aa18.58■□□□□ 0.56
SDCBP-209ENST00000522243 STOML1Q9UBI4 398 aa18.58■□□□□ 0.56
SDCBP-209ENST00000522243 PROCRQ9UNN8 238 aa18.58■□□□□ 0.56
SDCBP-209ENST00000522243 HIVEP1P15822 2718 aa18.57■□□□□ 0.56
SDCBP-209ENST00000522243 A0A0J9YW62 118 aa18.57■□□□□ 0.56
SDCBP-209ENST00000522243 TNFSF11O14788 317 aa18.57■□□□□ 0.56
SDCBP-209ENST00000522243 CXCL13O43927 109 aa18.57■□□□□ 0.56
SDCBP-209ENST00000522243 GOSR1O95249 250 aa18.57■□□□□ 0.56
SDCBP-209ENST00000522243 ATE1O95260 518 aa18.57■□□□□ 0.56
SDCBP-209ENST00000522243 SERPINE1P05121 402 aa18.57■□□□□ 0.56
SDCBP-209ENST00000522243 CD99P14209 185 aa18.57■□□□□ 0.56
SDCBP-209ENST00000522243 CLDN8P56748 225 aa18.57■□□□□ 0.56
SDCBP-209ENST00000522243 ABCE1P61221 599 aaKnown RBP18.57■□□□□ 0.56
SDCBP-209ENST00000522243 RPS26P62854 115 aaKnown RBP18.57■□□□□ 0.56
SDCBP-209ENST00000522243 HBA1P69905 142 aa18.57■□□□□ 0.56
SDCBP-209ENST00000522243 ZNF117Q03924 483 aa18.57■□□□□ 0.56
SDCBP-209ENST00000522243 MAD2L1Q13257 205 aaPredicted RBP18.57■□□□□ 0.56
SDCBP-209ENST00000522243 CTU2Q2VPK5 515 aaKnown RBP18.57■□□□□ 0.56
SDCBP-209ENST00000522243 NDUFAF6Q330K2 333 aa18.57■□□□□ 0.56
SDCBP-209ENST00000522243 OR4F3Q6IEY1 312 aa18.57■□□□□ 0.56
SDCBP-209ENST00000522243 CBLN3Q6UW01 205 aa18.57■□□□□ 0.56
SDCBP-209ENST00000522243 ZNF550Q7Z398 422 aa18.57■□□□□ 0.56
SDCBP-209ENST00000522243 CLECL1Q8IZS7 167 aa18.57■□□□□ 0.56
SDCBP-209ENST00000522243 CHDHQ8NE62 594 aaPredicted RBP18.57■□□□□ 0.56
SDCBP-209ENST00000522243 OR5D16Q8NGK9 328 aa18.57■□□□□ 0.56
SDCBP-209ENST00000522243 SFXN5Q8TD22 340 aa18.57■□□□□ 0.56
SDCBP-209ENST00000522243 ACTRT2Q8TDY3 377 aa18.57■□□□□ 0.56
SDCBP-209ENST00000522243 ADGRG7Q96K78 797 aa18.57■□□□□ 0.56
SDCBP-209ENST00000522243 OR7D2Q96RA2 312 aa18.57■□□□□ 0.56
SDCBP-209ENST00000522243 NOP53Q9NZM5 478 aaKnown RBP18.57■□□□□ 0.56
SDCBP-209ENST00000522243 UQCRHLA0A096LP55 91 aa18.56■□□□□ 0.56
SDCBP-209ENST00000522243 DIAPH2O60879 1101 aa18.56■□□□□ 0.56
SDCBP-209ENST00000522243 NUDT14O95848 222 aa18.56■□□□□ 0.56
SDCBP-209ENST00000522243 CD8BP10966 210 aa18.56■□□□□ 0.56
SDCBP-209ENST00000522243 FCGR2AP12318 317 aa18.56■□□□□ 0.56
SDCBP-209ENST00000522243 IL11P20809 199 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms