RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-233	ENST00000522052	C9orf66	Q5T8R8	295 aa		4.05	□□□□□ -1.76
CTNNA1-233	ENST00000522052	ZNF613	Q6PF04	617 aa		4.05	□□□□□ -1.76
CTNNA1-233	ENST00000522052	KCNIP4	Q6PIL6	250 aa		4.05	□□□□□ -1.76
CTNNA1-233	ENST00000522052	NLRP9	Q7RTR0	991 aa		4.05	□□□□□ -1.76
CTNNA1-233	ENST00000522052	IFNE	Q86WN2	208 aa		4.05	□□□□□ -1.76
CTNNA1-233	ENST00000522052	LRRC49	Q8IUZ0	686 aa		4.05	□□□□□ -1.76
CTNNA1-233	ENST00000522052	C4orf32	Q8N8J7	132 aa		4.05	□□□□□ -1.76
CTNNA1-233	ENST00000522052	OR5D13	Q8NGL4	314 aa		4.05	□□□□□ -1.76
CTNNA1-233	ENST00000522052	RFESD	Q8TAC1	157 aa		4.05	□□□□□ -1.76
CTNNA1-233	ENST00000522052	ZNF597	Q96LX8	424 aa		4.05	□□□□□ -1.76
CTNNA1-233	ENST00000522052	C9orf85	Q96MD7	179 aa		4.05	□□□□□ -1.76
CTNNA1-233	ENST00000522052	SLC6A7	Q99884	636 aa		4.05	□□□□□ -1.76
CTNNA1-233	ENST00000522052	MCRIP2	Q9BUT9	160 aa	Known RBP	4.05	□□□□□ -1.76
CTNNA1-233	ENST00000522052	JPT2	Q9H910	190 aa		4.05	□□□□□ -1.76
CTNNA1-233	ENST00000522052	AMBN	Q9NP70	447 aa		4.05	□□□□□ -1.76
CTNNA1-233	ENST00000522052	MEPE	Q9NQ76	525 aa	Predicted RBP	4.05	□□□□□ -1.76
CTNNA1-233	ENST00000522052	FAM120C	Q9NX05	1096 aa	Known RBP	4.05	□□□□□ -1.76
CTNNA1-233	ENST00000522052	ELOVL2	Q9NXB9	296 aa		4.05	□□□□□ -1.76
CTNNA1-233	ENST00000522052	AIPL1	Q9NZN9	384 aa		4.05	□□□□□ -1.76
CTNNA1-233	ENST00000522052	RCOR3	Q9P2K3	495 aa	Predicted RBP	4.05	□□□□□ -1.76
CTNNA1-233	ENST00000522052	MRPL11	Q9Y3B7	192 aa	Known RBP	4.05	□□□□□ -1.76
CTNNA1-233	ENST00000522052	MAP3K4	Q9Y6R4	1608 aa		4.05	□□□□□ -1.76
CTNNA1-233	ENST00000522052	ALK	Q9UM73	1620 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052		A0A0U1RQS6	177 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	FAM240B	A0A1B0GVZ2	78 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	OR6C65	A6NJZ3	312 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	RPL37AP8	A6NKH3	93 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	EPM2A	B3EWF7	344 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	MSH4	O15457	936 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	FCMR	O60667	390 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	H2BFM	P0C1H6	154 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	GNPDA1	P46926	289 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	CSRP3	P50461	194 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	ATP5I	P56385	69 aa	Predicted RBP	4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	RPL23A	P62750	156 aa	Known RBP	4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	COX10	Q12887	443 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	ELAVL2	Q12926	359 aa	Known RBP	4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	MXD4	Q14582	209 aa	Predicted RBP	4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	CNPY1	Q3B7I2	92 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	PHYHD1	Q5SRE7	291 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	LGSN	Q5TDP6	509 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	APTX	Q7Z2E3	356 aa	Known RBP	4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	MOB3B	Q86TA1	216 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	ERICH1	Q86X53	443 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	OR1F12	Q8NHA8	337 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	MIPOL1	Q8TD10	442 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	NPY6R	Q99463	290 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	SLC39A3	Q9BRY0	314 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	MUTYH	Q9UIF7	546 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	ZNF221	Q9UK13	617 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	CDH9	Q9ULB4	789 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	RNF24	Q9Y225	148 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	NTNG1	Q9Y2I2	539 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	NCOA1	Q15788	1441 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	UHRF1BP1	Q6BDS2	1440 aa		4.04	□□□□□ -1.76
CTNNA1-233	ENST00000522052	KANK1	Q14678	1352 aa		4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	LRP5	O75197	1615 aa		4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	FRMPD4	Q14CM0	1322 aa		4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	HELT	A6NFD8	242 aa		4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	ECI2	O75521	394 aa		4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	SERPINA3	P01011	423 aa		4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	CDH5	P33151	784 aa	Predicted RBP	4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	ATP12A	P54707	1039 aa		4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	RPL8	P62917	257 aa	Known RBP	4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	IRX1	P78414	480 aa	Predicted RBP	4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	BEX3	Q00994	111 aa		4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	OTUD4	Q01804	1114 aa	Known RBP	4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	RIPPLY1	Q0D2K3	151 aa		4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	SLC5A12	Q1EHB4	618 aa		4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	TMEM44	Q2T9K0	475 aa		4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	CFAP221	Q4G0U5	840 aa		4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	LCE1A	Q5T7P2	110 aa		4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	TPGS2	Q68CL5	300 aa		4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	OR8G2P	Q6IF36	304 aa		4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	SLC22A9	Q8IVM8	553 aa		4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	C15orf54	Q8N8G6	183 aa		4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	OR10A7	Q8NGE5	316 aa		4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	AEN	Q8WTP8	325 aa	Known RBP	4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	LINC00479	Q96M42	142 aa		4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	AGAP3	Q96P47	875 aa		4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	TUBGCP2	Q9BSJ2	902 aa		4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	VPS37B	Q9H9H4	285 aa		4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	EXOSC3	Q9NQT5	275 aa	Known RBP	4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	EHF	Q9NZC4	300 aa		4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	GRIN2A	Q12879	1464 aa		4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	PTPRK	Q15262	1439 aa		4.03	□□□□□ -1.76
CTNNA1-233	ENST00000522052	DNMBP	Q6XZF7	1577 aa		4.02	□□□□□ -1.77
CTNNA1-233	ENST00000522052	IGHV3OR16-10	A0A075B7F0	116 aa		4.02	□□□□□ -1.77
CTNNA1-233	ENST00000522052	CTAGE15	A4D2H0	777 aa		4.02	□□□□□ -1.77
CTNNA1-233	ENST00000522052	SRPX2	O60687	465 aa	Predicted RBP	4.02	□□□□□ -1.77
CTNNA1-233	ENST00000522052	ZG16	O60844	167 aa		4.02	□□□□□ -1.77
CTNNA1-233	ENST00000522052	N4BP1	O75113	896 aa	Known RBP	4.02	□□□□□ -1.77
CTNNA1-233	ENST00000522052	LRAT	O95237	230 aa		4.02	□□□□□ -1.77
CTNNA1-233	ENST00000522052	CA1	P00915	261 aa	Predicted RBP	4.02	□□□□□ -1.77
CTNNA1-233	ENST00000522052	PNMT	P11086	282 aa		4.02	□□□□□ -1.77
CTNNA1-233	ENST00000522052	ETV5	P41161	510 aa		4.02	□□□□□ -1.77
CTNNA1-233	ENST00000522052	P2RY1	P47900	373 aa		4.02	□□□□□ -1.77
CTNNA1-233	ENST00000522052	CASP4	P49662	377 aa		4.02	□□□□□ -1.77
CTNNA1-233	ENST00000522052	RND3	P61587	244 aa		4.02	□□□□□ -1.77
CTNNA1-233	ENST00000522052	HNRNPA0	Q13151	305 aa	Known RBP	4.02	□□□□□ -1.77

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