RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 AP1S3Q96PC3 154 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 SLC6A16Q9GZN6 736 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 PNMTP11086 282 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 TPMTP51580 245 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 DCAF7P61962 342 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 GALEQ14376 348 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 CCDC58Q4VC31 144 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 AADACL4Q5VUY2 407 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 TMEM151AQ8N4L1 468 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 ATOH1Q92858 354 aaPredicted RBP15.22■□□□□ 0.03
USP42-207ENST00000521713 SLC29A1Q99808 456 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 EVA1AQ9H8M9 152 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 SCN9AQ15858 1988 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 SMIM30A4D0T7 59 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 CLDN24A6NM45 220 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 ZFAND5O76080 213 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 KIAA1024LP59773 190 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 ACTBP60709 375 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 ACTG1P63261 375 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 CGB2Q6NT52 195 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 GTPBP8Q8N3Z3 284 aaPredicted RBP15.22■□□□□ 0.03
USP42-207ENST00000521713 ACBD7Q8N6N7 88 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 OR2T4Q8NH00 348 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 ZFP90Q8TF47 636 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 SFXN2Q96NB2 322 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 A0A0G2JMP0 313 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 FOXE1O00358 373 aaPredicted RBP15.22■□□□□ 0.03
USP42-207ENST00000521713 CASC3O15234 703 aaKnown RBP15.22■□□□□ 0.03
USP42-207ENST00000521713 OR2T1O43869 369 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 IFNA1P01562 189 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 ICAM2P13598 275 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 RPL34P49207 117 aaKnown RBP15.22■□□□□ 0.03
USP42-207ENST00000521713 FOXA1P55317 472 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 BCL7AQ4VC05 210 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 C9orf50Q5SZB4 431 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 DCAF12Q5T6F0 453 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 DGLUCYQ7Z3D6 616 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 HMGN2P46Q86SG4 172 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 NAGSQ8N159 534 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 OR4M2Q8NGB6 313 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 GAREM1Q9H706 876 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 KLHL9Q9P2J3 617 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 H0YGG7 62 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 ANKRD28O15084 1053 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 JRKO75564 520 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 ITGAMP11215 1152 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 CYCSP99999 105 aaKnown RBP15.22■□□□□ 0.03
USP42-207ENST00000521713 ZNF619Q8N2I2 560 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 C19orf47Q8N9M1 422 aaKnown RBP15.22■□□□□ 0.03
USP42-207ENST00000521713 OR4K5Q8NGD3 323 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 TESCQ96BS2 214 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 MYADMQ96S97 322 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 STARD5Q9NSY2 213 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 ZFP57Q9NU63 452 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 SLC35A3Q9Y2D2 325 aa15.22■□□□□ 0.03
USP42-207ENST00000521713 NSG1A0A0A6YYJ2 146 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 UCHL1P09936 223 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 UBL4AP11441 157 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 DCTP40126 519 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 FRKP42685 505 aaPredicted RBP15.21■□□□□ 0.03
USP42-207ENST00000521713 MRPS10P82664 201 aaKnown RBP15.21■□□□□ 0.03
USP42-207ENST00000521713 SELPLGQ14242 412 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 FAM69AQ5T7M9 428 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 OPN5Q6U736 354 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 FOXRED2Q8IWF2 684 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 ZNF595Q8IYB9 648 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 WFDC5Q8TCV5 224 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 SFXN5Q8TD22 340 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 MED30Q96HR3 178 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 PHB2Q99623 299 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 MAP3K3Q99759 626 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 KLHL21Q9UJP4 597 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 HMGN2P05204 90 aaKnown RBP15.21■□□□□ 0.03
USP42-207ENST00000521713 ARG2P78540 354 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 GGTA1PQ4G0N0 100 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 TMEM31Q5JXX7 168 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 BEST4Q8NFU0 473 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 UBXN10Q96LJ8 280 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 FN3KQ9H479 309 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 THSD7AQ9UPZ6 1657 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 ARNTLO00327 626 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 AP1G1O43747 822 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 UGT2B7P16662 529 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 PRDX3P30048 256 aaKnown RBP15.21■□□□□ 0.03
USP42-207ENST00000521713 BCL2L15Q5TBC7 163 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 TMPRSS9Q7Z410 1059 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 SLC41A3Q96GZ6 507 aa15.21■□□□□ 0.03
USP42-207ENST00000521713 SRA1Q9HD15 236 aaKnown RBP15.21■□□□□ 0.03
USP42-207ENST00000521713 F8W036 122 aa15.21■□□□□ 0.02
USP42-207ENST00000521713 ZNF43P17038 809 aa15.21■□□□□ 0.02
USP42-207ENST00000521713 PCGF2P35227 344 aa15.21■□□□□ 0.02
USP42-207ENST00000521713 RNF144AP50876 292 aaPredicted RBP15.21■□□□□ 0.02
USP42-207ENST00000521713 BLOC1S1P78537 153 aa15.21■□□□□ 0.02
USP42-207ENST00000521713 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.21■□□□□ 0.02
USP42-207ENST00000521713 RAB11FIP2Q7L804 512 aa15.21■□□□□ 0.02
USP42-207ENST00000521713 SLC7A13Q8TCU3 470 aa15.21■□□□□ 0.02
USP42-207ENST00000521713 BCL7CQ8WUZ0 217 aaPredicted RBP15.21■□□□□ 0.02
USP42-207ENST00000521713 CNTNAP3BQ96NU0 1288 aa15.21■□□□□ 0.02
USP42-207ENST00000521713 C1GALT1Q9NS00 363 aa15.21■□□□□ 0.02
USP42-207ENST00000521713 GPR83Q9NYM4 423 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms