RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 ST13P4Q8IZP2 240 aaPredicted RBP6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 ARMC10Q8N2F6 343 aa6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 C10orf111Q8N326 155 aa6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 LINC01555Q8NAE3 123 aa6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 FBXO15Q8NCQ5 510 aaPredicted RBP6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 OR2M7Q8NG81 312 aa6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 OR7A2PQ8NGA2 310 aa6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 OR10H5Q8NGA6 315 aa6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 OR9A1PQ8NGU1 263 aa6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 OR10A6Q8NH74 314 aa6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 ZNF480Q8WV37 535 aa6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 TFGQ92734 400 aaPredicted RBP6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 GFM2Q969S9 779 aaKnown RBP6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 SARAFQ96BY9 339 aa6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 REPS1Q96D71 796 aa6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 ITCHQ96J02 903 aa6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 FOPNLQ96NB1 174 aa6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 SEPHS2Q99611 448 aa6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 TBCDQ9BTW9 1192 aa6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 OSBPL11Q9BXB4 747 aa6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 EBPLQ9BY08 206 aa6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 CHODLQ9H9P2 273 aa6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 MKKSQ9NPJ1 570 aaPredicted RBP6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 OR6C2Q9NZP2 312 aa6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 MAGEL2Q9UJ55 1249 aa6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 ING1Q9UK53 422 aaPredicted RBP6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 LAMP3Q9UQV4 416 aa6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 PCDHB14Q9Y5E9 798 aa6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 V9GYQ6 96 aa6.62□□□□□ -1.35
CTNNA1-227ENST00000521387 DOCK7Q96N67 2140 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 ELOVL7A1L3X0 281 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 MAGEB17A8MXT2 336 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 FAM220BPB1ANY3 271 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 H0YIV9 168 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 GSTA4O15217 222 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 SCN2BO60939 215 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 SH3BGRLO75368 114 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 ERN1O75460 977 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 ETHE1O95571 254 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 CPSF4O95639 269 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 IL18BPO95998 194 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 FAM58BPP0C7Q3 252 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 PCNAP12004 261 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 CDH1P12830 882 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 NPPBP16860 134 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 PTPN6P29350 595 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 CDKN1AP38936 164 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 HNF4AP41235 474 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 HNRNPFP52597 415 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 RPS13P62277 151 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 PLGLB1Q02325 96 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 FAM27E3Q08E93 113 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 DDX39BQ13838 428 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 DOC2BQ14184 412 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 E2F2Q14209 437 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 KIR2DS3Q14952 304 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 ZC3H12BQ5HYM0 836 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 NHSL2Q5HYW2 709 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 INTS11Q5TA45 600 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 TBPL2Q6SJ96 375 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 ZNF551Q7Z340 670 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 LUZP2Q86TE4 346 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 CARM1Q86X55 608 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 LRRC56Q8IYG6 542 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 CYP4Z2PQ8N1L4 340 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 FAM109AQ8N4B1 249 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 CBR4Q8N4T8 237 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 C2orf73Q8N5S3 287 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 PACRGLQ8N7B6 248 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 FAM86B1Q8N7N1 296 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 ZNF611Q8N823 705 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 OR2T12Q8NG77 320 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 HM13Q8TCT9 377 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 METTL21AQ8WXB1 218 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 NEIL2Q969S2 332 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 TESCQ96BS2 214 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 AURKBQ96GD4 344 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 RNF145Q96MT1 663 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 CCDC115Q96NT0 180 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 MTERF1Q99551 399 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 C9orf16Q9BUW7 83 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 THUMPD3Q9BV44 507 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 CHID1Q9BWS9 393 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 YIPF3Q9GZM5 350 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 GORASP2Q9H8Y8 452 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 NTN4Q9HB63 628 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 VPS29Q9UBQ0 182 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 NDRG3Q9UGV2 375 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 GDF2Q9UK05 429 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 RUVBL1Q9Y265 456 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 AP3M1Q9Y2T2 418 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 TMED5Q9Y3A6 229 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 PCDHGB3Q9Y5G1 929 aa6.61□□□□□ -1.35
CTNNA1-227ENST00000521387 A0A0J9YVX5 310 aa6.6□□□□□ -1.35
CTNNA1-227ENST00000521387 G3V3Y1 287 aa6.6□□□□□ -1.35
CTNNA1-227ENST00000521387 UPK1AO00322 258 aa6.6□□□□□ -1.35
CTNNA1-227ENST00000521387 CXCR6O00574 342 aa6.6□□□□□ -1.35
CTNNA1-227ENST00000521387 CLOCKO15516 846 aa6.6□□□□□ -1.35
CTNNA1-227ENST00000521387 SCELO95171 688 aa6.6□□□□□ -1.35
CTNNA1-227ENST00000521387 PGM3O95394 542 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms