RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 SLC6A7Q99884 636 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 ATF6BQ99941 703 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 CITED1Q99966 193 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 CHCHD5Q9BSY4 110 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 TM2D1Q9BX74 207 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 GON7Q9BXV9 100 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 PUS3Q9BZE2 481 aaKnown RBP2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 GLIPR2Q9H4G4 154 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 RNF41Q9H4P4 317 aaPredicted RBP2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 JPT2Q9H910 190 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 AMBNQ9NP70 447 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 DCAF16Q9NXF7 216 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 MRPL39Q9NYK5 338 aaKnown RBP2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 ZNF221Q9UK13 617 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 HPCAL4Q9UM19 191 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 BARX2Q9UMQ3 279 aaPredicted RBP2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 SLC9A8Q9Y2E8 581 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 DDX49Q9Y6V7 483 aaKnown RBP2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 SPACA6W5XKT8 324 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 MYO3AQ8NEV4 1616 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 PNPLA6Q8IY17 1366 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 KIF1BO60333 1816 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 INO80Q9ULG1 1556 aaPredicted RBP2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 MROH2AA6NES4 1674 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 TET3O43151 1660 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 ABCC5O15440 1437 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 PTPRGP23470 1445 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 NUP160Q12769 1436 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 TROQ12816 1431 aaPredicted RBP2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 ZCCHC11Q5TAX3 1644 aaKnown RBP2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 ANKRD26Q9UPS8 1709 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 TRAV26-1A0A087WT03 109 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 C15orf38-AP3S2A0A0A6YYH1 394 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 K7ENP7 123 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 SLC17A2O00624 439 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 OR7A17O14581 309 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 NUDT21O43809 227 aaKnown RBP2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 IGHG4P01861 327 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 UGT2B4P06133 528 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 PVRP15151 417 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 BCL3P20749 454 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 ZNF10P21506 573 aaPredicted RBP2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 MMP11P24347 488 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 PSMA2P25787 234 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 MAGEA5P43359 124 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 P2RY1P47900 373 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 ALDH3B2P48448 385 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 CASP4P49662 377 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 NOVA1P51513 510 aaKnown RBP2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 RIDAP52758 137 aaKnown RBP2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 TNFRSF17Q02223 184 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 MAP2K1Q02750 393 aaPredicted RBP2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 PLOD1Q02809 727 aaPredicted RBP2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 BNIP1Q12981 228 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 ZNF154Q13106 437 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 EIF2B1Q14232 305 aaKnown RBP2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 MAPK6Q16659 721 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 MRGPRG-AS1Q2M3A8 158 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 NHLRC3Q5JS37 347 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 DCST2Q5T1A1 773 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 LEMD1Q68G75 181 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 REP15Q6BDI9 236 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 DOK6Q6PKX4 331 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 ZYG11AQ6WRX3 759 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 TIPARPQ7Z3E1 657 aaKnown RBP2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 LRRC75A-AS1Q8N1F1 130 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 BPIFB2Q8N4F0 458 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 TBCKQ8TEA7 893 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 SH3YL1Q96HL8 342 aaPredicted RBP2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 C9orf85Q96MD7 179 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 TGM7Q96PF1 710 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 NPY6RQ99463 290 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 MCRIP2Q9BUT9 160 aaKnown RBP2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 LRRC61Q9BV99 259 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 ZBP1Q9H171 429 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 VPS33BQ9H267 617 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 VCX2Q9H322 139 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 GNG12Q9UBI6 72 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 MUTYHQ9UIF7 546 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 CRLS1Q9UJA2 301 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 PTBP2Q9UKA9 531 aaKnown RBP2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 KLK13Q9UKR3 277 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 RASD1Q9Y272 281 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 POLDIP2Q9Y2S7 368 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 L3MBTL1Q9Y468 752 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 KDM5AP29375 1690 aaKnown RBP2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 CACNA1FO60840 1977 aa2.69□□□□□ -1.98
HMGN1P28-201ENST00000521340 FRMPD4Q14CM0 1322 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 UHRF1BP1Q6BDS2 1440 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 ZMYM4Q5VZL5 1548 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 CLASP1Q7Z460 1538 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 DUOX2Q9NRD8 1548 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 GPATCH8Q9UKJ3 1502 aaKnown RBP2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 A0A1W2PNV4 684 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 METTL21EPA6NDL7 271 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 SHISA9B4DS77 424 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 SAP18O00422 153 aaKnown RBP2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 STX11O75558 287 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 RHOBTB1O94844 696 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 NUDT14O95848 222 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms