RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 TTMPQ5BVD1 217 aa8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 AGBL2Q5U5Z8 902 aa8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 EEF1A1P5Q5VTE0 462 aa8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 AAGABQ6PD74 315 aa8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 PLXDC2Q6UX71 529 aa8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 PAMR1Q6UXH9 720 aa8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 ZYG11AQ6WRX3 759 aa8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 IFNEQ86WN2 208 aa8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 SLC44A2Q8IWA5 706 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 FADS6Q8N9I5 356 aa8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 CHDHQ8NE62 594 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 FAM76AQ8TAV0 307 aa8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 EFHD2Q96C19 240 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 INTS12Q96CB8 462 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 SFXN2Q96NB2 322 aa8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 DACH2Q96NX9 599 aa8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 BBS4Q96RK4 519 aa8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 TMEM109Q9BVC6 243 aa8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 RBM24Q9BX46 236 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 CENPHQ9H3R5 247 aa8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 PLEKHF2Q9H8W4 249 aa8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 PPCSQ9HAB8 311 aa8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 TMBIM4Q9HC24 238 aa8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 MID1IP1Q9NPA3 183 aa8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 TAS2R9Q9NYW1 312 aa8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 EDARQ9UNE0 448 aa8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 C19orf53Q9UNZ5 99 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 WBP11Q9Y2W2 641 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 MED13LQ71F56 2210 aa8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 MED12Q93074 2177 aa8.38□□□□□ -1.07
CTNNA1-221ENST00000520339 HCFC1P51610 2035 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 ACANP16112 2415 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 A0A1W2PPM1 405 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 SMIM23A6NLE4 172 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 POLR3GO15318 223 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 FADS1O60427 444 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 NPHS1O60500 1241 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 COQ9O75208 318 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 TNFSF13O75888 250 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 GOSR1O95249 250 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 PSMG1O95456 288 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 HRGP04196 525 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 KLK2P20151 261 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 IL12BP29460 328 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 EVI2BP34910 448 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 KRT20P35900 424 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 MC3RP41968 323 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 NCBP2P52298 156 aaKnown RBP eCLIP8.37□□□□□ -1.071e-7■□□□□ 8.9
CTNNA1-221ENST00000520339 DSCR4P56555 118 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 CLDN15P56746 228 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 DNAJB13P59910 316 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 ZNF763Q0D2J5 394 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 LSAMPQ13449 338 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 KRTAP21-3Q3LHN1 58 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 SPDYAQ5MJ70 313 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 CAMKMTQ7Z624 323 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 OR2L13Q8N349 312 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 RIBC1Q8N443 379 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 CCNYL1Q8N7R7 359 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 OR2M3Q8NG83 312 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 OR4K17Q8NGC6 315 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 ARL8AQ96BM9 186 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 ELP4Q96EB1 424 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 CCDC126Q96EE4 140 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 DTNBP1Q96EV8 351 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 MISP3Q96FF7 219 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 ATP6V1G3Q96LB4 118 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 AMDHD1Q96NU7 426 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 ALPK1Q96QP1 1244 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 RTN4RQ9BZR6 473 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 ROPN1BQ9BZX4 212 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 PIGMQ9H3S5 423 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 DSN1Q9H410 356 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 GLIPR2Q9H4G4 154 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 CXorf56Q9H5V9 222 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 ROPN1Q9HAT0 212 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 TNFRSF12AQ9NP84 129 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 MYNNQ9NPC7 610 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 GALNT8Q9NY28 637 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 FLRT3Q9NZU0 649 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 PSMC3IPQ9P2W1 217 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 DKKL1Q9UK85 242 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 GRID1Q9ULK0 1009 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 RPH3AQ9Y2J0 694 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 ZNF281Q9Y2X9 895 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 OR10H1Q9Y4A9 318 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 CCL27Q9Y4X3 112 aa8.37□□□□□ -1.07
CTNNA1-221ENST00000520339 EML6Q6ZMW3 1958 aa8.36□□□□□ -1.07
CTNNA1-221ENST00000520339 A0A1W2PNV4 684 aa8.36□□□□□ -1.07
CTNNA1-221ENST00000520339 A0A1W2PPR1 153 aa8.36□□□□□ -1.07
CTNNA1-221ENST00000520339 UPK1AO00322 258 aa8.36□□□□□ -1.07
CTNNA1-221ENST00000520339 RGS16O15492 202 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-221ENST00000520339 RSL1D1O76021 490 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-221ENST00000520339 RAF1P04049 648 aa8.36□□□□□ -1.07
CTNNA1-221ENST00000520339 JUNP05412 331 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-221ENST00000520339 CRHP06850 196 aa8.36□□□□□ -1.07
CTNNA1-221ENST00000520339 MYL2P10916 166 aa8.36□□□□□ -1.07
CTNNA1-221ENST00000520339 PEPDP12955 493 aa8.36□□□□□ -1.07
CTNNA1-221ENST00000520339 TCEA1P23193 301 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms