RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 CRHBPP24387 322 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 TIA1P31483 386 aaKnown RBP eCLIP8.23□□□□□ -1.09
CSMD1-206ENST00000520002 RAP2BP61225 183 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 GRASPQ7Z6J2 395 aaPredicted RBP8.23□□□□□ -1.09
CSMD1-206ENST00000520002 IL17RDQ8NFM7 739 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 PITHD1Q9GZP4 211 aaPredicted RBP8.23□□□□□ -1.09
CSMD1-206ENST00000520002 SLC35E2BP0CK96 405 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 SGCAQ16586 387 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 ALG10BQ5I7T1 473 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 CCDC116Q8IYX3 515 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 FAM86B1Q8N7N1 296 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 RBP7Q96R05 134 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 PTGES2Q9H7Z7 377 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 SPO11Q9Y5K1 396 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 C21orf33P30042 268 aaPredicted RBP8.23□□□□□ -1.09
CSMD1-206ENST00000520002 NRIP1P48552 1158 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 DLK2Q6UY11 383 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 OR4C5Q8NGB2 326 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 OR4K14Q8NGD5 310 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 RHOXF1Q8NHV9 184 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 FEZF1A0PJY2 475 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 LRIT2A6NDA9 550 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 GCGRP47871 477 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 SGSHP51688 502 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 PER3P56645 1201 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 EIF4HQ15056 248 aaKnown RBP8.23□□□□□ -1.09
CSMD1-206ENST00000520002 GKN2Q86XP6 184 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 HHIPL1Q96JK4 782 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 G6PC3Q9BUM1 346 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 B3GNT2Q9NY97 397 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 RIMS3Q9UJD0 308 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 SNNO75324 88 aaPredicted RBP8.23□□□□□ -1.09
CSMD1-206ENST00000520002 AKAIN1P0CW23 69 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 GATMP50440 423 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 VAMP3Q15836 100 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 SMN1Q16637 294 aaKnown RBP8.23□□□□□ -1.09
CSMD1-206ENST00000520002 TMPRSS7Q7RTY8 843 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 TSPYL5Q86VY4 417 aaPredicted RBP8.23□□□□□ -1.09
CSMD1-206ENST00000520002 DTWD1Q8N5C7 304 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 DUSP19Q8WTR2 217 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 MMABQ96EY8 250 aaPredicted RBP8.23□□□□□ -1.09
CSMD1-206ENST00000520002 SIGLEC10Q96LC7 697 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 TMEM121BQ9BXQ6 578 aaPredicted RBP8.23□□□□□ -1.09
CSMD1-206ENST00000520002 TDP1Q9NUW8 608 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 LUZP4Q9P127 313 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 RASD1Q9Y272 281 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 MED12Q93074 2177 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 KLK3P07288 261 aaPredicted RBP8.23□□□□□ -1.09
CSMD1-206ENST00000520002 AARDQ4LEZ3 155 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 NIPAL3Q6P499 406 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 MAPK15Q8TD08 544 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 ACTRT3Q9BYD9 372 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 CHRDQ9H2X0 955 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 MAGIXQ9H6Y5 334 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 PATZ1Q9HBE1 687 aaKnown RBP8.23□□□□□ -1.09
CSMD1-206ENST00000520002 C19orf25Q9UFG5 118 aaPredicted RBP8.23□□□□□ -1.09
CSMD1-206ENST00000520002 SIX4Q9UIU6 781 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 PRELID3BQ9Y3B1 194 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 PCDHGA5Q9Y5G8 931 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 TSPAN11A1L157 253 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 FAM72CH0Y354 149 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 SLC2A5P22732 501 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 ARNTP27540 789 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 MSX1P28360 303 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 TAGLN2P37802 199 aaKnown RBP8.23□□□□□ -1.09
CSMD1-206ENST00000520002 FXYD4P59646 89 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 FAM189BP81408 668 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 DEFB134Q4QY38 66 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 FAM72AQ5TYM5 149 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 FAM72DQ6L9T8 149 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 BPHLQ86WA6 291 aaPredicted RBP8.23□□□□□ -1.09
CSMD1-206ENST00000520002 FAM72BQ86X60 149 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 BAGE3Q86Y29 109 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 BAGE2Q86Y30 109 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 ZNF439Q8NDP4 499 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 ZNF596Q8TC21 504 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 OR2C1O95371 312 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 FBXO45P0C2W1 286 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 HSD17B1P14061 328 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 CPN1P15169 458 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 Q3ZCU0 254 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 PLBD1Q6P4A8 553 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 LYPD4Q6UWN0 246 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 TRIM46Q7Z4K8 759 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 DOK4Q8TEW6 326 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 OR11A1Q9GZK7 315 aa8.23□□□□□ -1.09
CSMD1-206ENST00000520002 PARP12Q9H0J9 701 aaKnown RBP8.23□□□□□ -1.09
CSMD1-206ENST00000520002 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.23□□□□□ -1.09
CSMD1-206ENST00000520002 PEX12O00623 359 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 HLA-AP01891 365 aaKnown RBP8.22□□□□□ -1.09
CSMD1-206ENST00000520002 HOXB2P14652 356 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 ARSBP15848 533 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 SPNP16150 400 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 GABRB3P28472 473 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 SLAMF1Q13291 335 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 LACC1Q8IV20 430 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 MTMR14Q8NCE2 650 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 NETO1Q8TDF5 533 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 NPY6RQ99463 290 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 ALG8Q9BVK2 526 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms