RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 RMND5AQ9H871 391 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 HPS4Q9NQG7 708 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 SOHLH2Q9NX45 425 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 KLHL28Q9NXS3 571 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 TAS2R16Q9NYV7 291 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 SPASTQ9UBP0 616 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 ZNF107Q9UII5 783 aaPredicted RBP2.82□□□□□ -1.96
VPS13B-207ENST00000518569 RNF24Q9Y225 148 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 NUDCQ9Y266 331 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 SBNO1A3KN83 1393 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 NPC1L1Q9UHC9 1359 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 POGZQ7Z3K3 1410 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 CCDC88BA6NC98 1476 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 ABCC2Q92887 1545 aa2.82□□□□□ -1.96
VPS13B-207ENST00000518569 NOTCH3Q9UM47 2321 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 A0A087WZY1 265 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 CYB561D2O14569 222 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 SRPX2O60687 465 aaPredicted RBP2.81□□□□□ -1.96
VPS13B-207ENST00000518569 LRP3O75074 770 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 RHBDL1O75783 438 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 SYNGR4O95473 234 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 PRAMEF12O95522 483 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 PIGRP01833 764 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 APOA1P02647 267 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 POU2F1P14859 743 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 HNRNPA2B1P22626 353 aaKnown RBP2.81□□□□□ -1.96
VPS13B-207ENST00000518569 UCP1P25874 307 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 RPA1P27694 616 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 SFNP31947 248 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 CA8P35219 290 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 NUMBP49757 651 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 CCL11P51671 97 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 SLC7A2P52569 658 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 HNRNPFP52597 415 aaKnown RBP2.81□□□□□ -1.96
VPS13B-207ENST00000518569 MFAP2P55001 183 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 PLTPP55058 493 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 MTTPP55157 894 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 ASPHQ12797 758 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 PDZK1IP1Q13113 114 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 ABRAXAS2Q15018 415 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 NCF4Q15080 339 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 STK38Q15208 465 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 OLFML2AQ68BL7 652 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 ATRAIDQ6UW56 229 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 SYVN1Q86TM6 617 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 RANBP3LQ86VV4 465 aaPredicted RBP2.81□□□□□ -1.96
VPS13B-207ENST00000518569 ZNF573Q86YE8 665 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 SLC22A9Q8IVM8 553 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 NKAIN4Q8IVV8 208 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 ITPRIPQ8IWB1 547 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 CD302Q8IX05 232 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 SLC7A5P1Q8MH63 180 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 GPD1LQ8N335 351 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 RELL2Q8NC24 303 aaPredicted RBP2.81□□□□□ -1.96
VPS13B-207ENST00000518569 ZNF397Q8NF99 534 aaPredicted RBP2.81□□□□□ -1.96
VPS13B-207ENST00000518569 TMEM185AQ8NFB2 350 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 OR52J3Q8NH60 311 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 AKR7LQ8NHP1 331 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 EXOC6Q8TAG9 804 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 TMEM37Q8WXS4 190 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 ANKRD7Q92527 254 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 BIRC7Q96CA5 298 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 ZBED6CLQ96FA7 236 aaPredicted RBP2.81□□□□□ -1.96
VPS13B-207ENST00000518569 SAMD8Q96LT4 415 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 CBWD1Q9BRT8 395 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 FTHL17Q9BXU8 183 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 TRIM9Q9C026 710 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 RAB33BQ9H082 229 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 DDX47Q9H0S4 455 aaKnown RBP2.81□□□□□ -1.96
VPS13B-207ENST00000518569 FAM124BQ9H5Z6 455 aaPredicted RBP2.81□□□□□ -1.96
VPS13B-207ENST00000518569 PALMDQ9NP74 551 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 STARD5Q9NSY2 213 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 CUTCQ9NTM9 273 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 PRR34Q9NV39 138 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 DHRS4-AS1Q9P1J3 65 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 LHX3Q9UBR4 397 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 SLC9A8Q9Y2E8 581 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 NUP160Q12769 1436 aa2.81□□□□□ -1.96
VPS13B-207ENST00000518569 CFAP65Q6ZU64 1925 aaKnown RBP2.81□□□□□ -1.96
VPS13B-207ENST00000518569 GLI2P10070 1586 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 TEX14Q8IWB6 1497 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 CARMIL1Q5VZK9 1371 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 SERTM2A0A1B0GWG4 89 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 GOLGA8OA6NCC3 632 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 CFAP73A6NFT4 308 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 PCP4L1A6NKN8 68 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 LRRIQ3A6PVS8 624 aaPredicted RBP2.8□□□□□ -1.96
VPS13B-207ENST00000518569 GOLGA8NF8WBI6 632 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 GOLGA6L19H0YKK7 550 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 PHOX2AO14813 284 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 LSM1O15116 133 aaKnown RBP2.8□□□□□ -1.96
VPS13B-207ENST00000518569 LRRTM2O43300 516 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 ZNF253O75346 499 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 MFN2O95140 757 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 MBD3O95983 291 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 OAS1P00973 400 aaKnown RBP2.8□□□□□ -1.96
VPS13B-207ENST00000518569 TGFAP01135 160 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 IGHG3P01860 377 aa2.8□□□□□ -1.96
VPS13B-207ENST00000518569 CXCL10P02778 98 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms