RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 STX1BP61266 288 aa16.89■□□□□ 0.29
FAM49B-208ENST00000518344 LRRC74AQ0VAA2 488 aa16.89■□□□□ 0.29
FAM49B-208ENST00000518344 GPR68Q15743 365 aa16.89■□□□□ 0.29
FAM49B-208ENST00000518344 ARHGAP11BQ3KRB8 267 aa16.89■□□□□ 0.29
FAM49B-208ENST00000518344 OLIG3Q7RTU3 272 aa16.89■□□□□ 0.29
FAM49B-208ENST00000518344 CHDHQ8NE62 594 aaPredicted RBP16.89■□□□□ 0.29
FAM49B-208ENST00000518344 OR9I1Q8NGQ6 314 aa16.89■□□□□ 0.29
FAM49B-208ENST00000518344 B4GALNT2Q8NHY0 566 aa16.89■□□□□ 0.29
FAM49B-208ENST00000518344 MIPOL1Q8TD10 442 aa16.89■□□□□ 0.29
FAM49B-208ENST00000518344 THOC1Q96FV9 657 aaKnown RBP16.89■□□□□ 0.29
FAM49B-208ENST00000518344 CALHM2Q9HA72 323 aa16.89■□□□□ 0.29
FAM49B-208ENST00000518344 ZNF446Q9NWS9 450 aa16.89■□□□□ 0.29
FAM49B-208ENST00000518344 OR2M5A3KFT3 312 aa16.88■□□□□ 0.29
FAM49B-208ENST00000518344 CLCA1A8K7I4 914 aa16.88■□□□□ 0.29
FAM49B-208ENST00000518344 H3BNH8 94 aa16.88■□□□□ 0.29
FAM49B-208ENST00000518344 GTPBP1O00178 669 aaKnown RBP16.88■□□□□ 0.29
FAM49B-208ENST00000518344 RFXANKO14593 260 aa16.88■□□□□ 0.29
FAM49B-208ENST00000518344 FCMRO60667 390 aa16.88■□□□□ 0.29
FAM49B-208ENST00000518344 STX11O75558 287 aa16.88■□□□□ 0.29
FAM49B-208ENST00000518344 AGR2O95994 175 aa16.88■□□□□ 0.29
FAM49B-208ENST00000518344 AK1P00568 194 aa16.88■□□□□ 0.29
FAM49B-208ENST00000518344 ZNF708P17019 499 aa16.88■□□□□ 0.29
FAM49B-208ENST00000518344 KHKP50053 298 aa16.88■□□□□ 0.29
FAM49B-208ENST00000518344 POLR2JP52435 117 aaKnown RBP16.88■□□□□ 0.29
FAM49B-208ENST00000518344 BCL2A1Q16548 175 aa16.88■□□□□ 0.29
FAM49B-208ENST00000518344 GLYR1Q49A26 553 aaPredicted RBP16.88■□□□□ 0.29
FAM49B-208ENST00000518344 KLHL26Q53HC5 615 aa16.88■□□□□ 0.29
FAM49B-208ENST00000518344 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.88■□□□□ 0.294e-6■■■■■ 32.2
FAM49B-208ENST00000518344 CHMP1BQ7LBR1 199 aa16.88■□□□□ 0.29
FAM49B-208ENST00000518344 RNF130Q86XS8 419 aa16.88■□□□□ 0.29
FAM49B-208ENST00000518344 MEIOBQ8N635 442 aa16.88■□□□□ 0.29
FAM49B-208ENST00000518344 NAXEQ8NCW5 288 aa16.88■□□□□ 0.29
FAM49B-208ENST00000518344 PNPT1Q8TCS8 783 aaKnown RBP16.88■□□□□ 0.29
FAM49B-208ENST00000518344 SMPDL3BQ92485 455 aa16.88■□□□□ 0.29
FAM49B-208ENST00000518344 VPS33AQ96AX1 596 aa16.88■□□□□ 0.29
FAM49B-208ENST00000518344 CCDC28BQ9BUN5 200 aa16.88■□□□□ 0.29
FAM49B-208ENST00000518344 RUBCNLQ9H714 662 aa16.88■□□□□ 0.29
FAM49B-208ENST00000518344 RMND5AQ9H871 391 aa16.88■□□□□ 0.29
FAM49B-208ENST00000518344 MKLN1Q9UL63 735 aa16.88■□□□□ 0.29
FAM49B-208ENST00000518344 CARD8Q9Y2G2 431 aa16.88■□□□□ 0.29
FAM49B-208ENST00000518344 NCOA6Q14686 2063 aaPredicted RBP16.88■□□□□ 0.29
FAM49B-208ENST00000518344 A0A087WZY1 265 aa16.87■□□□□ 0.29
FAM49B-208ENST00000518344 LINC01387J3KSC0 135 aa16.87■□□□□ 0.29
FAM49B-208ENST00000518344 SEC14L5O43304 696 aa16.87■□□□□ 0.29
FAM49B-208ENST00000518344 ANP32DO95626 131 aa16.87■□□□□ 0.29
FAM49B-208ENST00000518344 NUDT14O95848 222 aa16.87■□□□□ 0.29
FAM49B-208ENST00000518344 BMP5P22003 454 aa16.87■□□□□ 0.29
FAM49B-208ENST00000518344 CEACAM8P31997 349 aaPredicted RBP16.87■□□□□ 0.29
FAM49B-208ENST00000518344 ZNF41P51814 821 aaPredicted RBP16.87■□□□□ 0.29
FAM49B-208ENST00000518344 ZNF117Q03924 483 aa16.87■□□□□ 0.29
FAM49B-208ENST00000518344 TIGD2Q4W5G0 525 aa16.87■□□□□ 0.29
FAM49B-208ENST00000518344 PDZK1Q5T2W1 519 aa16.87■□□□□ 0.29
FAM49B-208ENST00000518344 PLXDC2Q6UX71 529 aa16.87■□□□□ 0.29
FAM49B-208ENST00000518344 DNAJC14Q6Y2X3 702 aaPredicted RBP16.87■□□□□ 0.29
FAM49B-208ENST00000518344 MTERF4Q7Z6M4 381 aaKnown RBP16.87■□□□□ 0.29
FAM49B-208ENST00000518344 ITCHQ96J02 903 aa16.87■□□□□ 0.29
FAM49B-208ENST00000518344 MED17Q9NVC6 651 aa16.87■□□□□ 0.29
FAM49B-208ENST00000518344 DTNAQ9Y4J8 743 aa16.87■□□□□ 0.29
FAM49B-208ENST00000518344 FAM234BA2RU67 622 aa16.86■□□□□ 0.29
FAM49B-208ENST00000518344 MBD3L4A6NDZ8 208 aaPredicted RBP16.86■□□□□ 0.29
FAM49B-208ENST00000518344 MBD3L3A6NE82 208 aaPredicted RBP16.86■□□□□ 0.29
FAM49B-208ENST00000518344 MBD3L5A6NJ08 208 aaPredicted RBP16.86■□□□□ 0.29
FAM49B-208ENST00000518344 NPIPB9F8W1W9 429 aa16.86■□□□□ 0.29
FAM49B-208ENST00000518344 H0YC42 278 aa16.86■□□□□ 0.29
FAM49B-208ENST00000518344 DVL2O14641 736 aa16.86■□□□□ 0.29
FAM49B-208ENST00000518344 OIP5O43482 229 aa16.86■□□□□ 0.29
FAM49B-208ENST00000518344 SUCLG1P53597 346 aaKnown RBP16.86■□□□□ 0.29
FAM49B-208ENST00000518344 TPD52P55327 224 aaPredicted RBP16.86■□□□□ 0.29
FAM49B-208ENST00000518344 GPAT3Q53EU6 434 aa16.86■□□□□ 0.29
FAM49B-208ENST00000518344 C6orf10Q5SRN2 563 aa16.86■□□□□ 0.29
FAM49B-208ENST00000518344 HEPHL1Q6MZM0 1159 aa16.86■□□□□ 0.29
FAM49B-208ENST00000518344 CBLN3Q6UW01 205 aa16.86■□□□□ 0.29
FAM49B-208ENST00000518344 MEX3BQ6ZN04 569 aaKnown RBP16.86■□□□□ 0.29
FAM49B-208ENST00000518344 C9orf106Q8NAJ2 232 aa16.86■□□□□ 0.29
FAM49B-208ENST00000518344 RFWD2Q8NHY2 731 aa16.86■□□□□ 0.29
FAM49B-208ENST00000518344 MBD3L2Q8NHZ7 208 aaPredicted RBP16.86■□□□□ 0.29
FAM49B-208ENST00000518344 ROPN1LQ96C74 230 aa16.86■□□□□ 0.29
FAM49B-208ENST00000518344 KLHDC3Q9BQ90 382 aa16.86■□□□□ 0.29
FAM49B-208ENST00000518344 NMUR2Q9GZQ4 415 aa16.86■□□□□ 0.29
FAM49B-208ENST00000518344 AP4B1Q9Y6B7 739 aa16.86■□□□□ 0.29
FAM49B-208ENST00000518344 HMGN4O00479 90 aa16.85■□□□□ 0.29
FAM49B-208ENST00000518344 TNFRSF21O75509 655 aa16.85■□□□□ 0.29
FAM49B-208ENST00000518344 KRT75O95678 551 aa16.85■□□□□ 0.29
FAM49B-208ENST00000518344 AGFG1P52594 562 aaKnown RBP16.85■□□□□ 0.29
FAM49B-208ENST00000518344 ZNF136P52737 540 aa16.85■□□□□ 0.29
FAM49B-208ENST00000518344 CLDN20P56880 219 aa16.85■□□□□ 0.29
FAM49B-208ENST00000518344 EEFSECP57772 596 aaKnown RBP16.85■□□□□ 0.29
FAM49B-208ENST00000518344 TFF3Q07654 80 aa16.85■□□□□ 0.29
FAM49B-208ENST00000518344 TMEM44Q2T9K0 475 aa16.85■□□□□ 0.29
FAM49B-208ENST00000518344 NDUFAF6Q330K2 333 aa16.85■□□□□ 0.29
FAM49B-208ENST00000518344 SLC25A35Q3KQZ1 300 aa16.85■□□□□ 0.29
FAM49B-208ENST00000518344 MSANTD1Q6ZTZ1 278 aa16.85■□□□□ 0.29
FAM49B-208ENST00000518344 P4HA3Q7Z4N8 544 aa16.85■□□□□ 0.29
FAM49B-208ENST00000518344 GRAMD2AQ8IUY3 354 aa16.85■□□□□ 0.29
FAM49B-208ENST00000518344 MCEMP1Q8IX19 187 aa16.85■□□□□ 0.29
FAM49B-208ENST00000518344 TMCO5AQ8N6Q1 288 aa16.85■□□□□ 0.29
FAM49B-208ENST00000518344 ZBTB8AQ96BR9 441 aa16.85■□□□□ 0.29
FAM49B-208ENST00000518344 RNF145Q96MT1 663 aa16.85■□□□□ 0.29
FAM49B-208ENST00000518344 TM9SF2Q99805 663 aa16.85■□□□□ 0.29
FAM49B-208ENST00000518344 SPOCK3Q9BQ16 436 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms